MGE detailed information
MGE type: IS/Tn MGE length: 438 bp
Accession: NC_002506 Location: 428335..428772 Organism: Vibrio cholerae O1 biovar El Tor str. N16961 Replicon: chromosome II
Accession: NC_002506 Location: 428335..428772 Organism: Vibrio cholerae O1 biovar El Tor str. N16961 Replicon: chromosome II
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| VC_RS15735 (VC_A0484) | 423604..423891 | + | 288 | WP_000426470.1 | hypothetical protein | - |
| VC_RS15740 (VC_A0485) | 424032..424403 | + | 372 | WP_001164080.1 | nucleotide pyrophosphohydrolase | - |
| VC_RS15745 (VC_A0486) | 424470..424895 | + | 426 | WP_001882332.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| VC_RS15750 (VC_A0487) | 424892..425425 | + | 534 | WP_000118351.1 | GNAT family N-acetyltransferase | Toxin Detail |
| VC_RS15760 (VC_A0488) | 425627..425884 | + | 258 | WP_000861987.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| VC_RS15765 (VC_A0489) | 425872..426174 | + | 303 | WP_000229317.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| VC_RS15770 (VC_A0490) | 426408..427325 | + | 918 | WP_000186333.1 | alpha/beta hydrolase | - |
| VC_RS15775 (VC_A0491) | 427482..427871 | + | 390 | WP_001081302.1 | hypothetical protein | - |
| VC_RS15780 (VC_A0492) | 428007..428216 | + | 210 | Protein_466 | GNAT family N-acetyltransferase | - |
| VC_RS15785 (VC_A0493) | 428335..428772 | + | 438 | WP_000503169.1 | IS200-IS605 family transposase IS1004 | Transposase |
| VC_RS15790 (VC_A0494) | 428836..429054 | + | 219 | WP_071908318.1 | GNAT family N-acetyltransferase | - |
| VC_RS15795 (VC_A0495) | 429229..430101 | + | 873 | WP_000254716.1 | DUF3800 domain-containing protein | - |
| VC_RS15800 (VC_A0496) | 430251..430850 | + | 600 | WP_001891245.1 | glutathione S-transferase N-terminal domain-containing protein | - |
| VC_RS15805 | 430907..431011 | + | 105 | WP_099607150.1 | acetyltransferase | - |
| VC_RS15810 (VC_A0497) | 431042..431311 | + | 270 | WP_001114075.1 | DUF4160 domain-containing protein | Toxin Detail |
| VC_RS15815 (VC_A0498) | 431305..431826 | + | 522 | WP_000921691.1 | DUF2442 domain-containing protein | Antitoxin Detail |
| VC_RS15820 | 432125..432250 | + | 126 | WP_001905700.1 | DUF645 family protein | - |
| VC_RS15825 (VC_A0501) | 432501..432896 | + | 396 | WP_001000867.1 | hypothetical protein | - |
| VC_RS15830 (VC_A0503) | 433035..433313 | - | 279 | WP_000578476.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| VC_RS15835 (VC_A0504) | 433310..433594 | - | 285 | WP_000381183.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Vibrio cholerae O395 | IS/Tn | TA22069, TA22070, TA22071, TA22072, TA22073 | NC_009456 | 806473..806910 | 0.002 | |
| Vibrio cholerae M66-2 | IS/Tn | TA23716, TA23717, TA23718, TA23719, TA23720, TA23721 | NC_012580 | 402350..402787 | 0 | |
| Vibrio cholerae O395 | IS/Tn | TA23736, TA23737, TA23738, TA23739, TA23740 | NC_012583 | 457032..457469 | 0.002 | |
| Vibrio cholerae MJ-1236 | IS/Tn | TA23778, TA23779, TA23780 | NC_012667 | 938381..938818 | 0 | |
| Vibrio cholerae O1 str. 2010EL-1786 | IS/Tn | TA25718, TA25719, TA25720, TA25721, TA25722 | NC_016446 | 128876..129313 | 0 | |
| Vibrio cholerae IEC224 | IS/Tn | TA26156, TA26157, TA26158, TA26159, TA26160 | NC_016945 | 428154..428591 | 0 | |
| Vibrio cholerae MS6 | IS/Tn | TA30647, TA30648, TA30649, TA30650, TA30651 | NZ_AP014525 | 438153..438590 | 0.002 | |
| Vibrio cholerae strain V060002 | IS/Tn | TA31949, TA31950, TA31951, TA31952, TA31953 | NZ_AP018677 | 1518353..1518790 | 0 | |
| Vibrio cholerae strain BCH-01536 | IS/Tn | TA38629, TA38630, TA38631, TA38632 | NZ_AP024548 | 106596..107033 | 0 | |
| Vibrio cholerae strain BCH-01536 | IS/Tn | TA38625 | NZ_AP024548 | 88179..88598 | 0.008 | |
| Vibrio cholerae strain IDH-00113 | IS/Tn | TA38646, TA38647, TA38648 | NZ_AP024550 | 881185..881622 | 0 | |
| Vibrio cholerae strain IDH-02387 | IS/Tn | TA38650, TA38651, TA38652, TA38653 | NZ_AP024552 | 679393..679830 | 0 | |
| Vibrio cholerae strain IDH-03329 | IS/Tn | TA38668, TA38669, TA38670, TA38671 | NZ_AP024554 | 219734..220171 | 0 | |
| Vibrio cholerae strain IDH-03506 | IS/Tn | TA38698, TA38699, TA38700 | NZ_AP024556 | 80684..81121 | 0 | |
| Vibrio cholerae O1 str. KW3 | IS/Tn | TA45815, TA45816, TA45817, TA45818, TA45819 | NZ_CP006948 | 403709..404146 | 0 | |
| Vibrio cholerae strain 2012EL-2176 | IS/Tn | TA46762, TA46763, TA46764, TA46765, TA46766 | NZ_CP007635 | 130114..130551 | 0 | |
| Vibrio cholerae O1 biovar El Tor strain FJ147 | IS/Tn | TA48158, TA48159, TA48160, TA48161, TA48162 | NZ_CP009041 | 402464..402901 | 0 | |
| Vibrio cholerae strain ICDC-VC661 | IS/Tn | TA56921, TA56922, TA56923, TA56924, TA56925 | NZ_CP012666 | 392464..392901 | 0 | |
| Vibrio cholerae strain 2012Env-9 | IS/Tn | TA57653, TA57654, TA57655, TA57656, TA57657 | NZ_CP012997 | 835116..835553 | 0 | |
| Vibrio cholerae strain Env-390 | IS/Tn | TA57700, TA57701, TA57702, TA57703, TA57704 | NZ_CP013013 | 836314..836751 | 0 | |
| Vibrio cholerae strain C5 | IS/Tn | TA58231, TA58232, TA58233, TA58234, TA58235 | NZ_CP013302 | 461858..462295 | 0 | |
| Vibrio cholerae strain CRC711 | IS/Tn | TA58252, TA58253, TA58254, TA58255, TA58256 | NZ_CP013304 | 420246..420683 | 0 | |
| Vibrio cholerae strain CRC1106 | IS/Tn | TA58276, TA58277, TA58278, TA58279, TA58280 | NZ_CP013306 | 456123..456560 | 0 | |
| Vibrio cholerae strain E1162 | IS/Tn | TA58319, TA58320, TA58321, TA58322, TA58323 | NZ_CP013310 | 589231..589668 | 0 | |
| Vibrio cholerae strain E1320 | IS/Tn | TA58337 | NZ_CP013312 | 811607..812044 | 0.005 | |
| Vibrio cholerae strain E1320 | IS/Tn | TA58342, TA58343, TA58344, TA58345, TA58346 | NZ_CP013312 | 836106..836543 | 0 | |
| Vibrio cholerae strain E9120 | IS/Tn | TA58366, TA58367, TA58368, TA58369, TA58370 | NZ_CP013314 | 461036..461473 | 0 | |
| Vibrio cholerae strain M2140 | IS/Tn | TA58385, TA58386, TA58387, TA58388, TA58389 | NZ_CP013316 | 214542..214979 | 0.002 | |
| Vibrio cholerae strain NCTC5395 | IS/Tn | TA58407, TA58408, TA58409, TA58410, TA58411 | NZ_CP013318 | 489405..489842 | 0 | |
| Vibrio cholerae strain NCTC9420 | IS/Tn | TA58428, TA58429, TA58430, TA58431, TA58432 | NZ_CP013320 | 428810..429247 | 0 | |
| Vibrio cholerae strain FDAARGOS_223 | IS/Tn | TA74614, TA74615, TA74616, TA74617, TA74618 | NZ_CP020407 | 756078..756515 | 0 | |
| Vibrio cholerae strain E7946 | IS/Tn | TA87029, TA87030, TA87031, TA87032, TA87033 | NZ_CP024163 | 426516..426953 | 0 | |
| Vibrio cholerae strain A1552 | IS/Tn | TA89000, TA89001, TA89002, TA89003, TA89004 | NZ_CP024868 | 426550..426987 | 0 | |
| Vibrio cholerae strain A1552 | IS/Tn | TA92515, TA92516, TA92517, TA92518, TA92519 | NZ_CP025937 | 425900..426337 | 0 | |
| Vibrio cholerae O1 biovar El Tor strain HC1037 | IS/Tn | TA95391, TA95388, TA95389, TA95390, TA95392 | NZ_CP026648 | 128806..129243 | 0 | |
| Vibrio cholerae strain N16961 | IS/Tn | TA104260, TA104261, TA104262, TA104263, TA104264 | NZ_CP028828 | 430645..431082 | 0 | |
| Vibrio cholerae strain A1552 | IS/Tn | TA104348, TA104349, TA104350, TA104351, TA104352 | NZ_CP028895 | 428747..429184 | 0 | |
| Vibrio cholerae strain E4 | IS/Tn | TA113794, TA113795, TA113796, TA113797, TA113798 | NZ_CP033513 | 133754..134191 | 0 | |
| Vibrio cholerae strain 20000 | IS/Tn | TA119900, TA119901 | NZ_CP036500 | 378304..378741 | 0.005 | |
| Vibrio cholerae strain VC1374 | IS/Tn | TA125048, TA125049, TA125050, TA125051, TA125052 | NZ_CP040173 | 970413..970850 | 0 | |
| Vibrio cholerae O1 strain AAS91 | IS/Tn | TA135192, TA135193, TA135194, TA135195, TA135196 | NZ_CP042300 | 835109..835546 | 0 | |
| Vibrio cholerae strain RFB16 | IS/Tn | TA139009 | NZ_CP043556 | 1065827..1066264 | 0.005 | |
| Vibrio cholerae O395 substr. TCP2 | IS/Tn | TA142367, TA142368, TA142369, TA142370, TA142371 | NZ_CP045718 | 806022..806459 | 0.002 | |
| Vibrio cholerae strain F9993 | IS/Tn | TA145056, TA145057, TA145058, TA145059, TA145060 | NZ_CP046841 | 329047..329484 | 0 | |
| Vibrio cholerae C6706 | IS/Tn | TA145074, TA145075, TA145076, TA145077, TA145078 | NZ_CP046845 | 5644..6081 | 0 | |
| Vibrio cholerae isolate CTMA_1441 | IS/Tn | TA145405, TA145406, TA145407, TA145408, TA145409 | NZ_CP047060 | 403731..404168 | 0.002 | |
| Vibrio cholerae C6706 | IS/Tn | TA145819, TA145817, TA145818, TA145820, TA145821 | NZ_CP047296 | 428737..429174 | 0 | |
| Vibrio cholerae O1 biovar El Tor strain C6709 | IS/Tn | TA145837, TA145838, TA145839, TA145840, TA145841 | NZ_CP047298 | 428734..429171 | 0 | |
| Vibrio cholerae O1 biovar El Tor strain P27459 | IS/Tn | TA145857, TA145858, TA145859, TA145860, TA145861 | NZ_CP047300 | 431864..432301 | 0 | |
| Vibrio cholerae O1 biovar El Tor strain DRC-193A | IS/Tn | TA145877, TA145878, TA145879, TA145880, TA145881 | NZ_CP047302 | 403708..404145 | 0 | |
| Vibrio cholerae O1 biovar El Tor strain E7946 | IS/Tn | TA145897, TA145898, TA145899, TA145900, TA145901 | NZ_CP047304 | 429323..429760 | 0 | |
| Vibrio cholerae O37 strain ATCC 25872 | IS/Tn | TA145915, TA145916, TA145917, TA145918 | NZ_CP047306 | 426296..426733 | 0 | |
| Vibrio cholerae strain L6G | IS/Tn | TA157924, TA157925 | NZ_CP053803 | 384484..384921 | 0.005 | |
| Vibrio cholerae strain SP6G | IS/Tn | TA157970, TA157971 | NZ_CP053807 | 702297..702734 | 0.007 | |
| Vibrio cholerae C6706 | IS/Tn | TA180878, TA180879, TA180880, TA180881, TA180882 | NZ_CP064351 | 495036..495473 | 0 | |
| Vibrio cholerae strain A1552 | IS/Tn | TA198991, TA198992, TA198993, TA198994 | NZ_CP072848 | 428747..429184 | 0 | |
| Vibrio cholerae MO10 | IS/Tn | TA199010, TA199011, TA199012, TA199013 | NZ_CP072850 | 394761..395198 | 0 | |
| Vibrio cholerae strain MS84A | IS/Tn | TA206614, TA206615 | NZ_CP077061 | 1043033..1043470 | 0 | |
| Vibrio cholerae strain ICDC-VC3741 | IS/Tn | TA211906, TA211907, TA211908, TA211909 | NZ_CP080466 | 939671..940108 | 0 | |
| Vibrio cholerae strain BY369 | IS/Tn | TA230527, TA230528, TA230529, TA230530 | NZ_CP090379 | 392464..392901 | 0 | |
| Vibrio cholerae strain PanChol | IS/Tn | TA230635, TA230636, TA230637, TA230638 | NZ_CP090400 | 842634..843071 | 0.002 | |
| Vibrio cholerae strain N1252 | IS/Tn | TA254478, TA254479, TA254480, TA254481 | NZ_CP102928 | 812929..813366 | 0.002 | |
| Vibrio cholerae O1 biovar El Tor str. N16961 | IS/Tn | TA293805, TA293806, TA293807, TA293808, TA293809 | NZ_LT906615 | 428333..428770 | 0 | |
| Vibrio cholerae strain A19 | IS/Tn | TA293834, TA293835, TA293836, TA293837, TA293838 | NZ_LT907990 | 428333..428770 | 0 | |
| Vibrio cholerae strain 4295STDY6534216 | IS/Tn | TA294348, TA294349, TA294350, TA294351, TA294352 | NZ_LT992487 | 904516..904953 | 0 | |
| Vibrio cholerae strain 4295STDY6534232 | IS/Tn | TA294368, TA294369, TA294370, TA294371, TA294372 | NZ_LT992489 | 386316..386753 | 0 | |
| Vibrio cholerae strain 4295STDY6534248 | IS/Tn | TA294418, TA294419, TA294420, TA294421, TA294422 | NZ_LT992493 | 285604..286041 | 0 | |
| Vibrio cholerae strain CNRVC190243 isolate YE-NCPHL-19014-PI | IS/Tn | TA295399, TA295400, TA295401, TA295402 | NZ_OW443148 | 448982..449419 | 0 | |
| Vibrio cholerae strain CNRVC190247 isolate YE-NCPHL-18035-PI | IS/Tn | TA295404 | NZ_OW443150 | 170840..171277 | 0.005 |