145820

Detailed information of TA system    

insolicoBioinformatically predicted

Overview


TA module


Type II Classification (family/domain) DhiAT/-
Location 431444..432228 Replicon chromosome
Accession NZ_CP047296
Organism Vibrio cholerae C6706

Toxin (Protein)


Gene name dhiT Uniprot ID A0A086SLD6
Locus tag GTF72_RS16145 Protein ID WP_001114075.1
Coordinates 431444..431713 (+) Length 90 a.a.

Antitoxin (Protein)


Gene name dhiA Uniprot ID Q9KM84
Locus tag GTF72_RS16150 Protein ID WP_000921691.1
Coordinates 431707..432228 (+) Length 174 a.a.

Genomic Context


Locus tag Coordinates Strand Size (bp) Protein ID Product Description
GTF72_RS16105 426810..427727 + 918 WP_000186333.1 alpha/beta hydrolase -
GTF72_RS16110 427884..428273 + 390 WP_001081302.1 hypothetical protein -
GTF72_RS16115 428409..428618 + 210 Protein_471 GNAT family N-acetyltransferase -
GTF72_RS16120 428737..429174 + 438 WP_000503169.1 IS200/IS605-like element IS1004 family transposase -
GTF72_RS16125 429238..429456 + 219 WP_071908318.1 GNAT family N-acetyltransferase -
GTF72_RS16130 429631..430503 + 873 WP_000254716.1 DUF3800 domain-containing protein -
GTF72_RS16135 430653..431252 + 600 WP_001891245.1 glutathione S-transferase N-terminal domain-containing protein -
GTF72_RS16140 431309..431413 + 105 WP_099607150.1 acetyltransferase -
GTF72_RS16145 431444..431713 + 270 WP_001114075.1 DUF4160 domain-containing protein Toxin
GTF72_RS16150 431707..432228 + 522 WP_000921691.1 DUF2442 domain-containing protein Antitoxin
GTF72_RS16155 432527..432652 + 126 WP_001905700.1 DUF645 family protein -
GTF72_RS16160 432903..433298 + 396 WP_001000867.1 hypothetical protein -
GTF72_RS16165 433437..433715 - 279 WP_000578476.1 type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family -
GTF72_RS16170 433712..433996 - 285 WP_000381183.1 type II toxin-antitoxin system RelB/DinJ family antitoxin -
GTF72_RS16175 434190..434705 + 516 WP_000343779.1 GNAT family N-acetyltransferase -
GTF72_RS16180 434762..434857 + 96 WP_099607151.1 acetyltransferase -
GTF72_RS16185 434889..435302 + 414 WP_000049420.1 VOC family protein -
GTF72_RS16190 435309..435441 - 133 Protein_486 hypothetical protein -
GTF72_RS16195 435857..437034 + 1178 WP_086010879.1 IS3-like element ISVch4 family transposase -

Associated MGEs


MGE
detail
Similar
MGEs
Relative
position
MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
- inside Genomic island catB9 - 306905..436165 129260
inside Integron - - 311985..435789 123804
flank IS/Tn - - 428737..429174 437


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains


Predicted by InterproScan

Toxin

(9-74)

Antitoxin

(4-59)


Sequences


Toxin        


Download         Length: 90 a.a.        Molecular weight: 10310.94 Da        Isoelectric Point: 6.6303

>T145820 WP_001114075.1 NZ_CP047296:431444-431713 [Vibrio cholerae C6706]
MPEIDALLGLSFCLYFFDNKQHKLPHIHVKYGSYELIIAIETGECLEGYLPNKQRKRAENHILEHREQLMVMWNKAVNGE
NPGKLGDLC

Download         Length: 270 bp

>T145820 NZ_CP062700:3669976-3670362 [Escherichia coli O157:H7]
ATGGGTGTGTATAAGGCAAGGCGATTCAGCCAAAGCACGAAAAAACTTGGTATTCACGATAAAGTTCTCATGGCTGCCGC
TGAAGAAGTGATGCAAGGCATATGGGAGGCTGATTTAGGTAGCGGTGTCATCAAAAAACGGTTACCCCTCCAACAAGGAA
AGAGTGGTGGAGCCAGAACAATTATCTTTTTTAAATCAGCAAATCATGTGTTTTTTTATGATGGTTGGTCCAAGAGTGGT
CTAAGCAGTAAAGGAAGCAAAGAAATCGAAGATGATGAACTGGCAGCCTACAAAAAAATGGCAAATGCATTTCTGGCCTT
TAGCAATAAGCAAATAGAGGATTTGATCGAAACTGGCTTCTTGATTGAGGTGAAAAATGAGCGATAA

Antitoxin


Download         Length: 174 a.a.        Molecular weight: 19409.01 Da        Isoelectric Point: 6.7342

>AT145820 WP_000921691.1 NZ_CP047296:431707-432228 [Vibrio cholerae C6706]
MLKVIDVDFVSDHTLELTFNDGYQGYADLSVYFKKAPFSEIKDFKRFSLTRDGSLNWDGNELTAATLRDITKGSQKSVEL
SFNVQEMEAVIKQASWESMMEGRPDILQAAIRSYVEQFGHGQVIAKAGIKSRTSAYRSLKPETTPNFGTLVQLGHAVIEL
AKDRTVANKEPRI

Download         Length: 522 bp

>AT145820 NZ_CP062700:3670352-3670681 [Escherichia coli O157:H7]
ATGAGCGATAAATTACAAATGATGCTGGAAGATGCAAAGGAACTGAATGCACTGGGCCTGATGTCTGATAGTGAGGTTGA
TGCCATTGCCGTCATGGTCAAAGCCCGTGAAGTCAGCGCCCGTATAGCCAAAGTCAAATCAATGACGGGTGAAGAGATCA
AAGCCATCCGCACCCGATACGGCATGTCACAATCCGTGCTGGCACATACAATGGGAATGTCAAAAGAAAGTGTCTCGAAA
TGGGAACGTAATGAAATAAAACCGAGCGGCCCGGCACTACGTATTTTGAATACATTGGCAATAAAAGGGCCGGAAGTTTT
TGCAAAGTAA

Similar Proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures


Toxin

Source ID Structure
AlphaFold DB A0A086SLD6


Antitoxin

Source ID Structure
AlphaFold DB Q9KM84

References