135196

Detailed information of TA system    

insolicoBioinformatically predicted

Overview


TA module


Type II Classification (family/domain) /DUF1778(antitoxin)
Location 838924..839879 Replicon chromosome
Accession NZ_CP042300
Organism Vibrio cholerae O1 strain AAS91

Toxin (Protein)


Gene name - Uniprot ID Q9KM94
Locus tag FKV26_RS17140 Protein ID WP_000118351.1
Coordinates 838924..839457 (-) Length 178 a.a.

Antitoxin (Protein)


Gene name - Uniprot ID -
Locus tag FKV26_RS17145 Protein ID WP_001882332.1
Coordinates 839454..839879 (-) Length 142 a.a.

Genomic Context


Locus tag Coordinates Strand Size (bp) Protein ID Product Description
FKV26_RS17095 834827..835045 - 219 WP_071908318.1 GNAT family N-acetyltransferase -
FKV26_RS17100 835109..835546 - 438 WP_000503169.1 IS200/IS605-like element IS1004 family transposase -
FKV26_RS17105 835665..835874 - 210 Protein_729 GNAT family N-acetyltransferase -
FKV26_RS17110 836010..836399 - 390 WP_001081302.1 hypothetical protein -
FKV26_RS17115 836574..836816 - 243 WP_000107462.1 hypothetical protein -
FKV26_RS17120 837024..837941 - 918 WP_033935911.1 alpha/beta hydrolase -
FKV26_RS17125 838175..838477 - 303 WP_000229317.1 type II toxin-antitoxin system RelE/ParE family toxin -
FKV26_RS17130 838465..838722 - 258 WP_000861987.1 type II toxin-antitoxin system Phd/YefM family antitoxin -
FKV26_RS17140 838924..839457 - 534 WP_000118351.1 GNAT family N-acetyltransferase Toxin
FKV26_RS17145 839454..839879 - 426 WP_001882332.1 DUF1778 domain-containing protein Antitoxin
FKV26_RS17150 839946..840317 - 372 WP_001164080.1 nucleotide pyrophosphohydrolase -
FKV26_RS17155 840565..840825 - 261 WP_032468027.1 DUF3709 domain-containing protein -
FKV26_RS17160 840843..841003 - 161 Protein_739 DUF3709 domain-containing protein -
FKV26_RS17165 841237..841461 - 225 WP_161571222.1 DUF3709 domain-containing protein -
FKV26_RS17170 841791..841901 - 111 WP_076025930.1 DUF645 family protein -
FKV26_RS17175 842286..842588 - 303 WP_000229325.1 type II toxin-antitoxin system RelE/ParE family toxin -
FKV26_RS17180 842576..842833 - 258 WP_070961997.1 type II toxin-antitoxin system Phd/YefM family antitoxin -
FKV26_RS17190 843306..844286 - 981 WP_000019368.1 IS5-like element ISVch5 family transposase -
FKV26_RS17195 844356..844682 - 327 Protein_745 hypothetical protein -

Associated MGEs


MGE
detail
Similar
MGEs
Relative
position
MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
- inside Genomic island catB9 - 827249..947639 120390
flank IS/Tn - - 835109..835546 437
flank IS/Tn - - 843306..844286 980
- inside Integron - - 828494..941258 112764


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains


Predicted by InterproScan

Toxin

(97-153)

Antitoxin

(57-133)


Sequences


Toxin        


Download         Length: 178 a.a.        Molecular weight: 20171.46 Da        Isoelectric Point: 9.1432

>T135196 WP_000118351.1 NZ_CP042300:c839457-838924 [Vibrio cholerae O1]
VSWGKEFVELSKSKHDRDSFDCGEQELNTFIKTQAAKHMQAGISRTMVLPSAHPLLNQKFAICAFYSVAPSSISRETLPA
QLAKKLPRYPIPVFLLAQLAVHKEFHGSGLGKVSLIRALKYLWEVNHHMRAYAIVVDCLTDSAQAFYTKFGFEVLCEHNE
RIRMFLPMKTVEQLFNQ

Download         Length: 534 bp

>T135196 NZ_CP042300:c839457-838924 [Vibrio cholerae O1]
GTGAGTTGGGGCAAAGAGTTTGTAGAACTTAGTAAATCAAAGCATGACCGCGACTCATTTGACTGTGGTGAGCAAGAGCT
AAACACATTTATCAAAACTCAAGCTGCAAAGCACATGCAAGCAGGTATTAGCCGAACAATGGTTTTACCTAGTGCTCACC
CACTGTTAAATCAAAAATTCGCTATTTGTGCCTTTTATAGTGTTGCACCGAGCTCAATCAGCCGAGAAACATTACCGGCA
CAATTAGCAAAGAAACTACCGAGGTATCCAATCCCTGTTTTTCTGTTGGCTCAGTTAGCTGTGCACAAAGAATTTCACGG
TTCTGGACTTGGAAAGGTCAGTCTAATCCGTGCGCTGAAGTACTTGTGGGAAGTGAATCATCACATGAGAGCATACGCAA
TAGTTGTGGATTGTCTGACAGATTCCGCTCAAGCGTTCTATACGAAGTTCGGCTTTGAAGTATTGTGCGAACATAATGAG
CGTATTCGTATGTTCTTACCGATGAAAACGGTAGAACAACTTTTTAATCAATAG

Antitoxin


Download         Length: 142 a.a.        Molecular weight: 15714.41 Da        Isoelectric Point: 7.6659

>AT135196 WP_001882332.1 NZ_CP042300:c839879-839454 [Vibrio cholerae O1]
MLCLSLVVMRCQPLRRALYSPSPRKLSVRIECALSLAYNRSTDGMYPYAGGVMATARLDIRLDEEIKAKAEKASALLGLK
SLTEYVVRLMDEDATHVIEEHESIMVKDSVFDEFMAACNKVKAPNQALLEAVKFTEKSGIK

Download         Length: 426 bp

>AT135196 NZ_CP042300:c839879-839454 [Vibrio cholerae O1]
TTGTTGTGTTTGAGTTTAGTGGTCATGCGTTGTCAGCCCCTTAGACGGGCGTTATATTCTCCCTCGCCCCGTAAACTTTC
CGTACGAATTGAATGTGCTTTAAGTTTGGCCTATAATCGCTCAACTGACGGAATGTATCCGTACGCAGGAGGGGTTATGG
CAACGGCACGTTTAGATATCCGCCTTGATGAAGAGATCAAGGCAAAAGCTGAAAAGGCATCGGCTTTACTTGGTTTAAAA
AGTCTCACTGAATATGTGGTGAGACTTATGGACGAAGATGCGACTCATGTTATTGAGGAGCATGAAAGTATTATGGTTAA
AGACAGTGTTTTTGACGAGTTTATGGCTGCGTGTAATAAAGTAAAAGCACCGAATCAAGCTTTGCTTGAAGCTGTTAAAT
TTACAGAGAAGAGCGGTATCAAGTGA

Similar Proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures


Toxin

Source ID Structure
AlphaFold DB Q9KM94


Antitoxin

Source ID Structure

References