MGE detailed information
MGE type: IS/Tn MGE length: 981 bp
Accession: NC_002506 Location: 416601..417581 Organism: Vibrio cholerae O1 biovar El Tor str. N16961 Replicon: chromosome II
Accession: NC_002506 Location: 416601..417581 Organism: Vibrio cholerae O1 biovar El Tor str. N16961 Replicon: chromosome II
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| VC_RS18760 | 411994..412165 | + | 172 | Protein_433 | DUF645 family protein | - |
| VC_RS15610 (VC_A0463) | 412374..412760 | + | 387 | WP_000703163.1 | VOC family protein | - |
| VC_RS15615 | 412962..413204 | + | 243 | WP_000107461.1 | hypothetical protein | - |
| VC_RS15620 (VC_A0465) | 413375..413752 | + | 378 | WP_000411109.1 | hypothetical protein | - |
| VC_RS18765 | 413809..413923 | + | 115 | Protein_437 | acetyltransferase | - |
| VC_RS15625 | 413872..414153 | + | 282 | WP_001894453.1 | DUF1289 domain-containing protein | - |
| VC_RS15635 | 414319..414432 | + | 114 | WP_001889158.1 | hypothetical protein | - |
| VC_RS15640 | 414381..414608 | + | 228 | WP_001894457.1 | DUF1289 domain-containing protein | - |
| VC_RS15650 (VC_A0468) | 414949..415281 | + | 333 | WP_000843587.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| VC_RS15655 (VC_A0469) | 415268..415582 | + | 315 | WP_000071008.1 | DNA-binding transcriptional regulator | Antitoxin Detail |
| VC_RS15660 (VC_A0470) | 415719..416153 | + | 435 | WP_000256036.1 | GNAT family N-acetyltransferase | - |
| VC_RS15665 (VC_A0471) | 416321..416476 | + | 156 | WP_000751734.1 | hypothetical protein | - |
| VC_RS15670 (VC_A0472) | 416601..417581 | - | 981 | WP_000019370.1 | IS5 family transposase ISVch5 | Transposase |
| VC_RS15675 (VC_A0473) | 417649..417955 | + | 307 | Protein_446 | CatB-related O-acetyltransferase | - |
| VC_RS15680 (VC_A0474) | 418092..418784 | + | 693 | WP_001047169.1 | GNAT family N-acetyltransferase | Antitoxin Detail |
| VC_RS15685 (VC_A0475) | 418784..419185 | + | 402 | WP_000351248.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| VC_RS15690 | 419155..419298 | + | 144 | WP_071908341.1 | DUF3265 domain-containing protein | - |
| VC_RS15695 (VC_A0476) | 419373..419786 | + | 414 | WP_000049417.1 | VOC family protein | - |
| VC_RS15700 (VC_A0477) | 420000..420251 | + | 252 | WP_001250179.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| VC_RS15705 (VC_A0478) | 420241..420528 | + | 288 | WP_000221354.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| VC_RS15710 (VC_A0479) | 420656..421111 | + | 456 | WP_001245327.1 | GNAT family N-acetyltransferase | - |
| VC_RS15715 (VC_A0480) | 421433..421585 | + | 153 | WP_001884520.1 | DUF645 family protein | - |
| VC_RS15720 (VC_A0481) | 421787..422284 | - | 498 | WP_000982260.1 | GNAT family N-acetyltransferase | Toxin Detail |
| VC_RS15725 (VC_A0482) | 422281..422553 | - | 273 | WP_000246253.1 | DUF1778 domain-containing protein | Antitoxin Detail |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Vibrio cholerae O395 | IS/Tn | TA22075, TA22076, TA22077 | NC_009456 | 837110..838090 | 0 | |
| Vibrio cholerae M66-2 | IS/Tn | TA23713, TA23714, TA23715, TA23716 | NC_012580 | 392295..393275 | 0 | |
| Vibrio cholerae O395 | IS/Tn | TA23732, TA23733, TA23734 | NC_012583 | 425852..426832 | 0 | |
| Vibrio cholerae MJ-1236 | IS/Tn | TA23783, TA23784, TA23785, TA23786 | NC_012667 | 968666..969646 | 0 | |
| Vibrio cholerae O1 str. 2010EL-1786 | IS/Tn | TA25714, TA25715, TA25716, TA25717 | NC_016446 | 117142..118122 | 0 | |
| Vibrio cholerae IEC224 | IS/Tn | TA26152, TA26153, TA26154, TA26155 | NC_016945 | 416420..417400 | 0 | |
| Vibrio cholerae strain V060002 | IS/Tn | TA31954, TA31955, TA31956, TA31957 | NZ_AP018677 | 1529544..1530524 | 0 | |
| Vibrio cholerae strain BCH-01536 | IS/Tn | TA38625, TA38626, TA38627, TA38628 | NZ_AP024548 | 94862..95842 | 0 | |
| Vibrio cholerae strain IDH-00113 | IS/Tn | TA38642, TA38643, TA38644, TA38645 | NZ_AP024550 | 869451..870431 | 0 | |
| Vibrio cholerae strain IDH-02387 | IS/Tn | TA38654, TA38655, TA38656 | NZ_AP024552 | 690582..691562 | 0 | |
| Vibrio cholerae strain IDH-03329 | IS/Tn | TA38672, TA38673, TA38674, TA38675 | NZ_AP024554 | 230925..231905 | 0 | |
| Vibrio cholerae strain IDH-03506 | IS/Tn | TA38695, TA38696, TA38697 | NZ_AP024556 | 68951..69931 | 0 | |
| Vibrio cholerae O1 str. KW3 | IS/Tn | TA45811, TA45812, TA45813, TA45814 | NZ_CP006948 | 391976..392956 | 0 | |
| Vibrio cholerae strain 2012EL-2176 | IS/Tn | TA46758, TA46759, TA46760, TA46761 | NZ_CP007635 | 118380..119360 | 0 | |
| Vibrio cholerae O1 biovar El Tor strain FJ147 | IS/Tn | TA48154, TA48155, TA48156, TA48157 | NZ_CP009041 | 390730..391710 | 0 | |
| Vibrio cholerae strain ICDC-VC661 | IS/Tn | TA56917, TA56918, TA56919, TA56920 | NZ_CP012666 | 380730..381710 | 0 | |
| Vibrio cholerae strain 2012Env-9 | IS/Tn | TA57656, TA57657, TA57658, TA57659, TA57660, TA57661 | NZ_CP012997 | 843313..844293 | 0.001 | |
| Vibrio cholerae strain 2012Env-9 | IS/Tn | TA57659, TA57660, TA57661 | NZ_CP012997 | 849893..850873 | 0.001 | |
| Vibrio cholerae strain Env-390 | IS/Tn | TA57703, TA57704, TA57705, TA57706, TA57707, TA57708 | NZ_CP013013 | 844511..845491 | 0.001 | |
| Vibrio cholerae strain Env-390 | IS/Tn | TA57706, TA57707, TA57708 | NZ_CP013013 | 851091..852071 | 0.001 | |
| Vibrio cholerae strain C5 | IS/Tn | TA58227, TA58228, TA58229, TA58230 | NZ_CP013302 | 450124..451104 | 0 | |
| Vibrio cholerae strain CRC711 | IS/Tn | TA58248, TA58249, TA58250, TA58251 | NZ_CP013304 | 408512..409492 | 0 | |
| Vibrio cholerae strain CRC1106 | IS/Tn | TA58272, TA58273, TA58274, TA58275 | NZ_CP013306 | 444389..445369 | 0 | |
| Vibrio cholerae strain E506 | IS/Tn | TA58291, TA58292, TA58293, TA58294 | NZ_CP013308 | 435265..436245 | 0 | |
| Vibrio cholerae strain E1162 | IS/Tn | TA58315, TA58316, TA58317, TA58318 | NZ_CP013310 | 577497..578477 | 0 | |
| Vibrio cholerae strain E1320 | IS/Tn | TA58338, TA58339, TA58340, TA58341 | NZ_CP013312 | 824372..825352 | 0 | |
| Vibrio cholerae strain E9120 | IS/Tn | TA58362, TA58363, TA58364, TA58365 | NZ_CP013314 | 449302..450282 | 0 | |
| Vibrio cholerae strain NCTC5395 | IS/Tn | TA58403, TA58404, TA58405, TA58406 | NZ_CP013318 | 477671..478651 | 0 | |
| Vibrio cholerae strain NCTC9420 | IS/Tn | TA58424, TA58425, TA58426, TA58427 | NZ_CP013320 | 417076..418056 | 0 | |
| Vibrio cholerae 2740-80 | IS/Tn | TA64439, TA64440, TA64441, TA64442 | NZ_CP016325 | 435420..436400 | 0 | |
| Vibrio cholerae strain FDAARGOS_223 | IS/Tn | TA74619, TA74620, TA74621, TA74622 | NZ_CP020407 | 767269..768249 | 0 | |
| Vibrio cholerae strain E7946 | IS/Tn | TA87025, TA87026, TA87027, TA87028 | NZ_CP024163 | 414782..415762 | 0 | |
| Vibrio cholerae strain A1552 | IS/Tn | TA88996, TA88997, TA88998, TA88999 | NZ_CP024868 | 414816..415796 | 0 | |
| Vibrio cholerae strain A1552 | IS/Tn | TA92511, TA92512, TA92513, TA92514 | NZ_CP025937 | 414166..415146 | 0.001 | |
| Vibrio cholerae O1 biovar El Tor strain HC1037 | IS/Tn | TA95384, TA95385, TA95386, TA95387 | NZ_CP026648 | 117072..118052 | 0 | |
| Vibrio cholerae strain N16961 | IS/Tn | TA104259, TA104256, TA104257, TA104258 | NZ_CP028828 | 418911..419891 | 0 | |
| Vibrio cholerae strain A1552 | IS/Tn | TA104344, TA104345, TA104346, TA104347 | NZ_CP028895 | 417013..417993 | 0 | |
| Vibrio cholerae strain E4 | IS/Tn | TA113799, TA113800, TA113801, TA113802 | NZ_CP033513 | 144945..145925 | 0 | |
| Vibrio cholerae strain VC1374 | IS/Tn | TA125044, TA125045, TA125046, TA125047 | NZ_CP040173 | 958940..959659 | 0.009 | |
| Vibrio cholerae O1 strain AAS91 | IS/Tn | TA135195, TA135196, TA135197, TA135198, TA135199, TA135200 | NZ_CP042300 | 843306..844286 | 0.001 | |
| Vibrio cholerae O1 strain AAS91 | IS/Tn | TA135198, TA135199, TA135200 | NZ_CP042300 | 849886..850866 | 0.001 | |
| Vibrio cholerae O395 substr. TCP2 | IS/Tn | TA142373, TA142374, TA142375 | NZ_CP045718 | 836659..837639 | 0 | |
| Vibrio cholerae strain 3569-08 | IS/Tn | TA144871, TA144872, TA144873, TA144874 | NZ_CP046743 | 590661..591641 | 0 | |
| Vibrio cholerae strain F9993 | IS/Tn | TA145061, TA145062, TA145063, TA145064 | NZ_CP046841 | 340238..341218 | 0 | |
| Vibrio cholerae C6706 | IS/Tn | TA145079, TA145080, TA145081, TA145082 | NZ_CP046845 | 16835..17815 | 0 | |
| Vibrio cholerae isolate CTMA_1441 | IS/Tn | TA145401, TA145402, TA145403, TA145404 | NZ_CP047060 | 391997..392977 | 0 | |
| Vibrio cholerae C6706 | IS/Tn | TA145814, TA145815, TA145816, TA145813 | NZ_CP047296 | 417003..417983 | 0 | |
| Vibrio cholerae O1 biovar El Tor strain C6709 | IS/Tn | TA145833, TA145834, TA145835, TA145836 | NZ_CP047298 | 417000..417980 | 0 | |
| Vibrio cholerae O1 biovar El Tor strain P27459 | IS/Tn | TA145853, TA145854, TA145855, TA145856 | NZ_CP047300 | 420130..421110 | 0 | |
| Vibrio cholerae O1 biovar El Tor strain DRC-193A | IS/Tn | TA145873, TA145874, TA145875, TA145876 | NZ_CP047302 | 391974..392954 | 0 | |
| Vibrio cholerae O1 biovar El Tor strain E7946 | IS/Tn | TA145893, TA145894, TA145895, TA145896 | NZ_CP047304 | 417589..418569 | 0 | |
| Vibrio cholerae O37 strain ATCC 25872 | IS/Tn | TA145911, TA145912, TA145913, TA145914 | NZ_CP047306 | 414094..415074 | 0 | |
| Vibrio cholerae C6706 | IS/Tn | TA180874, TA180875, TA180876, TA180877 | NZ_CP064351 | 483302..484282 | 0 | |
| Vibrio cholerae strain A1552 | IS/Tn | TA198989, TA198987, TA198988, TA198990 | NZ_CP072848 | 417013..417993 | 0 | |
| Vibrio cholerae MO10 | IS/Tn | TA199006, TA199007, TA199008, TA199009 | NZ_CP072850 | 383027..384007 | 0 | |
| Vibrio cholerae strain MS84A | IS/Tn | TA206601, TA206602, TA206603, TA206604 | NZ_CP077061 | 10051..11031 | 0 | |
| Vibrio cholerae strain ICDC-VC3741 | IS/Tn | TA211910, TA211911, TA211912, TA211913 | NZ_CP080466 | 950862..951842 | 0 | |
| Vibrio cholerae strain BY369 | IS/Tn | TA230523, TA230524, TA230525, TA230526 | NZ_CP090379 | 380730..381710 | 0 | |
| Vibrio cholerae strain PanChol | IS/Tn | TA230639, TA230640, TA230641, TA230642 | NZ_CP090400 | 853825..854805 | 0 | |
| Vibrio cholerae strain N1252 | IS/Tn | TA254474, TA254475, TA254476, TA254477 | NZ_CP102928 | 801195..802175 | 0 | |
| Vibrio cholerae O1 biovar El Tor str. N16961 | IS/Tn | TA293804, TA293801, TA293802, TA293803 | NZ_LT906615 | 416599..417579 | 0 | |
| Vibrio cholerae strain A19 | IS/Tn | TA293830, TA293831, TA293832, TA293833 | NZ_LT907990 | 416599..417579 | 0 | |
| Vibrio cholerae strain 4295STDY6534216 | IS/Tn | TA294353, TA294354, TA294355, TA294356 | NZ_LT992487 | 915707..916687 | 0 | |
| Vibrio cholerae strain 4295STDY6534232 | IS/Tn | TA294373, TA294374, TA294375, TA294376 | NZ_LT992489 | 397507..398487 | 0 | |
| Vibrio cholerae strain 4295STDY6534248 | IS/Tn | TA294414, TA294415, TA294416, TA294417 | NZ_LT992493 | 273870..274850 | 0 | |
| Vibrio cholerae strain CNRVC190243 isolate YE-NCPHL-19014-PI | IS/Tn | TA295395, TA295396, TA295397, TA295398 | NZ_OW443148 | 437248..438228 | 0 |