Pseudomonadaceae


experimental Experimental investigation has been performed.
insolico Bioinformatics investigation has been performed
T6SS ID Type Organism Replicon (Accession) Location Function
T6SS00003 experimentali3Pseudomonas aeruginosa PAO1chromosome (H1-T6SS) (NC_002516)83380..123495anti-bacterial; anti-eukaryotic; effector translocation; virulence
T6SS00004 experimentali1Pseudomonas aeruginosa PAO1chromosome (H2-T6SS) (NC_002516)1797958..1827821anti-eukaryotic; anti-bacterial; effector translocation; virulence
T6SS00005 experimentali4aPseudomonas aeruginosa PAO1chromosome (H3-T6SS) (NC_002516)2599893..2632231anti-eukaryotic; anti-bacterial; effector translocation; virulence
T6SS00539 experimentali4aPseudomonas fluorescens F113chromosome (NC_016830)2807673..2826705anti-bacterial
T6SS00540 experimentali3Pseudomonas fluorescens F113chromosome (NC_016830)6672386..6694009anti-bacterial
T6SS00764 experimentali3Pseudomonas protegens CHA0chromosome (NC_021237)6697981..6718631anti-bacterial; anti-eukaryotic
T6SS00013 experimentali1Pseudomonas putida KT2440chromosome (NC_002947)2984253..3012550anti-bacterial
T6SS00015 experimentali1Pseudomonas putida KT2440chromosome (NC_002947)4590927..4618219anti-bacterial
T6SS00014 experimentali4bPseudomonas putida KT2440chromosome (NC_002947)3470069..3499780anti-bacterial
T6SS00086 experimentali4bPseudomonas syringae pv. syringae B728achromosome (NC_007005)5866174..5915475effector translocation; adherence
T6SS00035 experimentali3Pseudomonas protegens Pf-5chromosome (NC_004129)6897920..6930515anti-bacterial; effector translocation
T6SS00042 experimentali1Pseudomonas syringae pv. tomato str. DC3000chromosome (NC_004578)6149242..6189243anti-eukaryotic; anti-bacterial; effector translocation; virulence
T6SS00150 experimentali3Pseudomonas aeruginosa UCBPP-PA14chromosome (NC_008463)82730..121410anti-eukaryotic; anti-bacterial; effector translocation; virulence
T6SS00152 experimentali1Pseudomonas aeruginosa UCBPP-PA14chromosome (NC_008463)3806993..3840213anti-eukaryotic; anti-bacterial; virulence
T6SS00151 experimentali4aPseudomonas aeruginosa UCBPP-PA14chromosome (NC_008463)3011563..3044708anti-eukaryotic; virulence
T6SS01219 experimentali4aPseudomonas syringae pv. actinidiae str. Shaanxi_M228chromosome (NZ_CP032631)3616254..3638573anti-bacterial; anti-eukaryotic; anti-adverse environment
T6SS01297 experimentali4bPseudomonas sp. JY-Qchromosome (NZ_CP011525)2910641..2930528anti-bacterial; anti-adverse environment
T6SS01211 experimentali1Pseudomonas aeruginosa PAKchromosome (NZ_CP020659)1118829..1137804-
T6SS01212 experimentali4aPseudomonas aeruginosa PAKchromosome (NZ_CP020659)1913764..1933758-
T6SS01213 experimentali3Pseudomonas aeruginosa PAKchromosome (NZ_CP020659)5670794..5696508-
T6SS01209 experimentalUnknownPseudomonas fluorescens strain MFE01chromosome (KX941483-KX941502)-anti-bacterial
T6SS01257 experimentalUnknownPseudomonas putida MTR4chromosome (-)-anti-bacterial
T6SS01269 experimentalUnknownPseudomonas aeruginosa CHAchromosome (-)--

experimental Experimental investigation has been performed.
insolico Bioinformatics investigation has been performed
Regulator ID Locus tag (Gene) Related T6SS Regulator type Regulatory pathway Organism                 Replicon (Accession) Coordinates (Strand) NCBI ID Target (Regulation)
REG0007 experimental Y880_04683 (pnp) T6SS01211 experimental; T6SS01212 experimental; T6SS01213 experimental protein RsmA regulatory pathway Pseudomonas aeruginosa PAK chromosome (NZ_CP020659) 4637120..4639225 (-) 489185761 PA0527.1 (RsmY) (↑); PA3621.1 (RsmZ) (↑)
REG0008 experimental PA0527.1 (RsmY) T6SS01211 experimental; T6SS01212 experimental; T6SS01213 experimental ncRNA RsmA regulatory pathway Pseudomonas aeruginosa PAO1 chromosome (NZ_CP020659) 586867..586990 (+) - RsmA (Y880_06257) (↓)
REG0009 experimental PA3621.1 (RsmZ) T6SS01211 experimental; T6SS01212 experimental; T6SS01213 experimental ncRNA RsmA regulatory pathway Pseudomonas aeruginosa PAO1 chromosome (NZ_CP020659) 4057543..4057658 (-) - RsmA (Y880_06257) (↓)
REG0010 experimental Y880_06257 (rsmA) T6SS01211 experimental; T6SS01212 experimental; T6SS01213 experimental protein RsmA regulatory pathway Pseudomonas aeruginosa PAK chromosome (NZ_CP020659) 6213838..6214644 (-) 510932573 PA4492 mRNA (↑)
REG0011 experimental Y880_05180 (rmsF) T6SS01211 experimental; T6SS01212 experimental; T6SS01213 experimental protein RsmA regulatory pathway Pseudomonas aeruginosa PAK chromosome (NZ_CP020659) 5147809..5148024 (-) 489186811 tssA1 expression (↑)
REG0012 experimental Y880_02189 (gacA/uvrY) T6SS01211 experimental; T6SS01212 experimental; T6SS01213 experimental protein TCS-RR Pseudomonas aeruginosa PAK chromosome (NZ_CP020659) 2199690..2200334 (-) 510933056 hcp expression (↓)
REG0013 experimental Y880_03649 (suhB) T6SS01211 experimental; T6SS01212 experimental; T6SS01213 experimental protein TCS regulatory pathway Pseudomonas aeruginosa PAK chromosome (NZ_CP020659) 3616623..3617438 (+) 489183406 Y880_02189 (gacA/uvrY) (↓)
REG0018 experimental PA4462 (RpoN) T6SS00003 experimental; T6SS00004 experimental; T6SS00005 experimental protein Global regulator Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 4992870..4994363 (+) 15599658 PA1512 (hcpA) promotor (↓); PA5267 (hcpB) promotor (↓)
REG0037 experimental Y880_05519 (dgcP) T6SS01211 experimental; T6SS01212 experimental; T6SS01213 experimental protein c-di-GMP regulatory pathway Pseudomonas aeruginosa PAK chromosome (NZ_CP020659) 5487251..5489266 (-) 489205065 the levels of c-di-GMP (↓)
REG0038 experimental PSA3335_06200 (dgcP) T6SS01041 insolico protein c-di-GMP regulatory pathway Pseudomonas savastanoi pv. savastanoi NCPPB 3335 chromosome (NZ_CP008742) 1344347..1346692 (+) 488618048 the levels of c-di-GMP (↓)
REG0040 experimental PA0592 (RsmA) T6SS00003 experimental protein RsmA regulatory pathway Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 650575..651381 (-) 15595789 FHA (PA0081) (↑)
REG0041 experimental PA5183a (RsmN) T6SS00003 experimental protein RsmA regulatory pathway Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 5836470..5836685 (-) 554753081 FHA (PA0081) (↑); PA3487 (pldA) expression (↑)
REG0042 experimental PA0075 (PppA) T6SS00003 experimental protein Tpp Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 90106..90834 (-) 15595273 PA0081 (Fha-1/TagH) (↑)
REG0043 experimental PA0074 (PpkA) T6SS00003 experimental protein Tpp Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 87000..90098 (-) 15595272 PA0081 (Fha-1/TagH) (↓)
REG0044 experimental PA2586 (gacA) T6SS00003 experimental protein TCS-RR Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 2925788..2926432 (-) 15597782 hcp1 (PA0085) expression and secretion (↓)
REG0045 experimental PA0610 (prtN) T6SS00003 experimental protein TCS-HK Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 672777..673091 (-) 15595807 PA0611 (prtR) (↑)
REG0046 experimental PA0611 (prtR) T6SS00003 experimental protein TCS-RR Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 673191..673961 (-) 15595808 hcp1 (PA0085) expression and secretion (↑); PA2586 (gacA) (↑)
REG0047 experimental PA0072 (TagS) T6SS00003 experimental protein Tpp Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 85085..86284 (-) 15595270 PA0073 (TagT) (↓)
REG0048 experimental PA0070 (TagQ) T6SS00003 experimental protein Tpp Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 82404..83318 (-) 15595268 PA0071 (tagR) (↓)
REG0049 experimental PA0073 (TagT) T6SS00003 experimental protein Tpp Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 86284..87003 (-) 15595271 PA0072 (TagS) (↓)
REG0050 experimental PA2492 (MexT) T6SS00003 experimental protein Unknown Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 2807469..2808512 (+) 15597688 T6SS transcripts (↑)
REG0051 experimental PA1006 T6SS00003 experimental protein Unknown Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 1090606..1090857 (+) 15596203 T6SS transcripts (↓)
REG0052 experimental PA0071 (tagR) T6SS00003 experimental protein Tpp Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 83380..85092 (-) 15595269 PA0074 (PpkA) (↓)
REG0053 experimental PA4856 (RetS) T6SS00003 experimental protein Global regulator Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 5452150..5454978 (+) 15600049 hcp1 (PA0085) expression and secretion (↑)
REG0054 experimental PA3974 (LadS) T6SS00003 experimental protein Global regulator Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 4453289..4455676 (-) 15599169 hcp1 (PA0085) expression and secretion (↓)
REG0055 experimental PA4109 (AmpR) T6SS00003 experimental protein Unknown Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 4592990..4593880 (-) 15599304 T6SS transcripts (↑)
REG0056 experimental PA0076 (TagF) T6SS00003 experimental protein Tpp Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 90844..91524 (-) 15595274 hcp1 (PA0086) secretion (↑)
REG0057 experimental PA0081 (Fha-1/TagH) T6SS00003 experimental protein Tpp Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 98263..99756 (-) 15595279 Unknown (↓); clpV (↓)
REG0058 experimental PA2976 (RNase E) T6SS00003 experimental protein Unknown Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 3332881..3336054 (+) 15598172 PA0077 (icmF1) expression (↑)
REG0059 experimental PA4704.1 (prrF1) T6SS00003 experimental; T6SS00004 experimental ncRNA QS regulatory pathway Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 5283960..5284110 (+) 4179187 T6SS transcripts (↓)
REG0060 experimental PA4704.2 (prrF2) T6SS00003 experimental; T6SS00004 experimental ncRNA QS regulatory pathway Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 5284172..5284319 (+) 4179185 T6SS transcripts (↓)
REG0061 experimental PA0996 (pqsA) T6SS00004 experimental protein Unknown Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 1078462..1080015 (+) 15596193 T6SS transcripts
REG0062 experimental PA1244 (QslA) T6SS00004 experimental protein QS regulatory pathway Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 1348060..1348401 (-) 15596441 H2-T6SS (PA1656) promotor (↑)
REG0063 experimental PA4778 (CueR) T6SS00004 experimental protein Transcription regulator Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 5366257..5366655 (+) 15599972 tssA2 (-173 to -140 relative to the ATG start codon) (↓); hcp2 (-208 to -159 relative to the ATG start codon) (↓)
REG0065 experimental PA1430 (LasR) T6SS00004 experimental protein Global regulator; QS regulatory pathway Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 1558171..1558890 (+) 15596627 H2-T6SS promotor P (hsiA2) (↓)
REG0066 experimental PA3476 (rhlI) T6SS00004 experimental protein QS regulatory pathway Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 3889139..3889744 (-) 15598672 PA3477 (RhlR) (↓)
REG0067 experimental PA3477 (RhlR) T6SS00004 experimental protein QS regulatory pathway Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 3889925..3890650 (-) 15598673 T6SS transcript (↓)
REG0068 experimental PA4764 (Fur) T6SS00004 experimental protein Global regulator Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 5351675..5352079 (-) 15599958 H2-T6SS Transcription (↑)
REG0069 experimental PA4462 (rpoN) T6SS00004 experimental protein Global regulator Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 4992870..4994363 (+) 15599658 T6SS transcript (↑)
REG0070 experimental pa1663 (sfa2) T6SS00004 experimental; T6SS00005 experimental protein Global regulator; QS regulatory pathway Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 1813395..1814906 (+) 15596860 PA4462 (rpoN) (↑); T6SS transcript (↑); T6SS transcript (↓)
REG0074 experimental PP_4373 (FleQ) T6SS00014 experimental protein c-di-GMP regulatory pathway Pseudomonas putida KT2440 chromosome (NC_002947) 4963882..4965357 (-) 26991062 K1-T6SS (hcp1) expression (↑)
REG0075 experimental PP_0952 (RopN) T6SS00014 experimental protein c-di-GMP regulatory pathway Pseudomonas putida KT2440 chromosome (NC_002947) 1094567..1096060 (-) 26987688 PP_4373 (FleQ) (↑)
REG0076 experimental PP_0914 (BifA) T6SS00014 experimental protein c-di-GMP regulatory pathway Pseudomonas putida KT2440 chromosome (NC_002947) 1055990..1058071 (-) 26987650 the levels of c-di-GMP (↓)
REG0091 experimental PFL_RS17995 (gacA/uvrY/SirA) T6SS00035 experimental protein TCS-RR Pseudomonas protegens Pf-5 chromosome (NC_004129) 4110513..4111154 (-) 499374263 T6SS transcripts (↓)
REG0092 experimental PFL_RS30815 (pppA) T6SS00035 experimental protein Tpp Pseudomonas protegens Pf-5 chromosome (NC_004129) 6902924..6903658 (-) 499376669 Hcp secretion (↑)
REG0096 experimental PSPTO_RS08845 (relA) T6SS00041 insolico; T6SS00042 experimental protein (p)ppGpp regulatory pathway Pseudomonas syringae pv. tomato str. DC3000 chromosome (NC_004578) 1863879..1866122 (+) 494457621 T6SS transcripts (↓)
REG0097 experimental PSPTO_RS00410 (spoT) T6SS00041 insolico; T6SS00042 experimental protein (p)ppGpp regulatory pathway Pseudomonas syringae pv. tomato str. DC3000 chromosome (NC_004578) 94805..96910 (-) 492171753 T6SS transcripts (↓)
REG0098 experimental PSPTO_RS04545 (fpRel) T6SS00041 insolico; T6SS00042 experimental protein (p)ppGpp regulatory pathway Pseudomonas syringae pv. tomato str. DC3000 chromosome (NC_004578) 927082..927900 (+) 499415849 T6SS transcripts (↓)
REG0099 experimental PSPTO_RS28060 (Sfa) T6SS00041 insolico; T6SS00042 experimental protein Global regulator Pseudomonas syringae pv. tomato str. DC3000 chromosome (NC_004578) 6165047..6166564 (-) 499418021 T6SS transcripts (↓)
REG0148 experimental PSYR_RS19090 (relA) T6SS00086 experimental protein (p)ppGpp regulatory pathway Pseudomonas syringae pv. syringae B728a chromosome (NC_007005) 4380642..4382885 (-) 499587809 T6SS transcripts (↓)
REG0149 experimental PSYR_RS01070 (spoT) T6SS00086 experimental protein (p)ppGpp regulatory pathway Pseudomonas syringae pv. syringae B728a chromosome (NC_007005) 223004..225109 (-) 489499092 T6SS transcripts (↓)
REG0150 experimental Psyr_3698 (gacS) T6SS00086 experimental protein TCS-HK Pseudomonas syringae pv. syringae B728a chromosome (NC_007005) 4385550..4388303 (+) 499587812 T6SS transcription (↓)
REG0151 experimental Psyr_4339 (ladS) T6SS00086 experimental protein QS regulatory pathway Pseudomonas syringae pv. syringae B728a chromosome (NC_007005) 5191591..5193585 (-) 639463044 T6SS transcription (↓)
REG0152 experimental Psyr_4408 (retS) T6SS00086 experimental protein QS regulatory pathway Pseudomonas syringae pv. syringae B728a chromosome (NC_007005) 5270882..5273671 (+) 489494774 T6SS transcription (↑)
REG0156 experimental pvfC T6SS00125 insolico protein Global regulator Pseudomonas entomophila L48 chromosome (NC_008027) - - T6SS secreted proteome (↓)
REG0157 experimental rmsF T6SS00150 experimental protein RsmA regulatory pathway Pseudomonas aeruginosa PA103 chromosome (NZ_JARI00000000) - - tssA1 RNA (↑); RsmY/Z (↑)
REG0158 experimental PA14_52570 (RsmA) T6SS00150 experimental protein RsmA regulatory pathway Pseudomonas aeruginosa UCBPP-PA14 chromosome (NC_008463) 4660393..4660578 (-) 489176459 RSMF (↑); tssA1 RNA (↑); RSMA (↑)
REG0159 experimental PA14_RS20260/PA1120 (YfiN/TpbB) T6SS00150 experimental protein c-di-GMP regulatory pathway Pseudomonas aeruginosa UCBPP-PA14 chromosome (NC_008463) 4435431..4436738 (-) 489207392 Hcp1 production (↓)
REG0160 experimental PA14_RS15060 (PA2133 phosphodiesterase) T6SS00150 experimental protein c-di-GMP regulatory pathway Pseudomonas aeruginosa UCBPP-PA14 chromosome (NC_008463) 3294000..3294857 (-) 489200657 Hcp1 production (↑)
REG0161 experimental PA14_RS06615 (WspR) T6SS00150 experimental protein c-di-GMP regulatory pathway Pseudomonas aeruginosa UCBPP-PA14 chromosome (NC_008463) 1413158..1414201 (+) 489183089 Hcp1 production (↓)
REG0162 experimental RsmY T6SS00150 experimental ncRNA RsmA regulatory pathway Pseudomonas aeruginosa UCBPP-PA14 chromosome (NC_008463) 596840..596963 (+) Unknown
REG0163 experimental RsmZ T6SS00150 experimental ncRNA RsmA regulatory pathway Pseudomonas aeruginosa UCBPP-PA14 chromosome (NC_008463) 1500352..1500467 (+) Unknown
REG0164 experimental PA14_RS05020 (LadS) T6SS00150 experimental protein QS regulatory pathway Pseudomonas aeruginosa UCBPP-PA14 chromosome (NC_008463) 1069280..1071716 (+) 15599169 Unknown
REG0165 experimental PA14_64230 (RetS) T6SS00150 experimental protein QS regulatory pathway Pseudomonas aeruginosa UCBPP-PA14 chromosome (NC_008463) 5722815..5725643 (+) 489202068 Unknown
REG0166 experimental PA14_45960 (lasR) T6SS00152 experimental; T6SS00151 experimental; T6SS00150 experimental protein QS regulatory pathway Pseudomonas aeruginosa UCBPP-PA14 chromosome (NC_008463) 4085339..4086058 (-) 489173455 TssA2 (PA14_43050) promotor (↓); HSI-III transcripts (↓); HSI-I transcripts (↑)
REG0167 experimental PA14_51340 (MvfR) T6SS00152 experimental; T6SS00151 experimental; T6SS00150 experimental protein QS regulatory pathway Pseudomonas aeruginosa UCBPP-PA14 chromosome (NC_008463) 4562837..4563835 (+) 489176730 Upstream of pqs operon (↓); HSI-III transcripts (↓); HSI-I transcripts (↑)
REG0168 experimental PA14_51380 (pqsE) T6SS00150 experimental; T6SS00152 experimental protein QS regulatory pathway Pseudomonas aeruginosa UCBPP-PA14 chromosome (NC_008463) 4566077..4566982 (-) 489176725 T6SS Transciption (↓)
REG0169 experimental PA14_22470 (PA3225) T6SS00150 experimental; T6SS00152 experimental; T6SS00151 experimental protein Global regulator Pseudomonas aeruginosa UCBPP-PA14 chromosome (NC_008463) 1955624..1956553 (-) 489182081 PA14_00990 (TssA) promotor (↓); TssA1 (PA14_00990) transcript (↑); TssA2 (PA14_43050) transcript (↑); TssB3 (PA14_34070) transcript (↑)
REG0170 experimental PA14_20290 (AmrZ) T6SS00150 experimental; T6SS00152 experimental; T6SS00151 experimental protein Global regulator Pseudomonas aeruginosa UCBPP-PA14 chromosome (NC_008463) 1747602..1747928 (-) 489182353 TssA1 (PA14_00990) promotor (↓); TssA2 (PA14_43050) promotor (↑); TssB3 (PA14_34070) promotor (↓)
REG0172 experimental PA14_48150 (QslA) T6SS00152 experimental protein QS regulatory pathway Pseudomonas aeruginosa UCBPP-PA14 chromosome (NC_008463) 4286222..4286536 (+) 489177206 H2-T6SS (PA14_43050) promotor (↑)
REG0253 experimental PAM18_RS12360 (gacA) T6SS00612 insolico; T6SS00613 insolico; T6SS00611 insolico protein TCS-RR Pseudomonas aeruginosa M18 chromosome (NC_017548) 2625815..2626459 (+) 489180874 hsiA1 operon transcript (↓); hsiA2 operon transcript (↓); hsiA3 operon transcript (↓)
REG0330 experimental Pchl3084_4333 (gacS) T6SS01266 insolico; T6SS01267 insolico protein TCS-RR Pseudomonas chlororaphis subsp. aureofaciens 30-84 chromosome (NZ_CM001559) 5113748..5116501 (+) 496335944 Pchl3084_3491 (gacA) (↓)
REG0331 experimental Pchl3084_3491 (gacA) T6SS01266 insolico; T6SS01267 insolico protein TCS-HK Pseudomonas chlororaphis subsp. aureofaciens 30-84 chromosome (NZ_CM001559) 4134794..4135435 (-) 496335231 Pchl3084_5419 (rsmY)promotor (↓); Pchl3084_1190 (rsmZ)promotor (↓); Pchl3084_1189 (rpoS)transcript (↓)
REG0334 experimental PSA3335_RS05390 (iaaM) T6SS01041 insolico protein IAA regulatory pathway Pseudomonas savastanoi pv. savastanoi NCPPB 3335 chromosome (NZ_CP008742) 1090961..1092634 (-) 488619197 The transcript levels of vgrG (↓)
REG0335 experimental PSA3335_RS05385 (iaaH) T6SS01041 insolico protein IAA regulatory pathway Pseudomonas savastanoi pv. savastanoi NCPPB 3335 chromosome (NZ_CP008742) 1089578..1090918 (-) 488619198 The transcript levels of vgrG (↓)
REG0351 experimental PSEBR_RS22825 (GacS) T6SS00431 insolico; T6SS00432 insolico protein TCS-RR Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome (NC_015379) 5188012..5190762 (+) 503459407 hcp1 transcript (↓); hcp2 transcript (↓)
REG0367 experimental H78_RS02920 (Hfq) - protein QS regulatory pathway Pseudomonas protegens strain H78 chromosome (NZ_CP013184) 662937..663197 (+) 495196588 T6SS transcription level (↓)
REG0368 experimental PA1544 (Anr) T6SS00004 experimental protein Global regulator Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 1681071..1681805 (-) 15596741 H2-T6SS transcriptional level and ModA secretion (↓)
REG0332 experimental GacS T6SS01269 experimental protein TCS-RR Pseudomonas aeruginosa cystic fibrosis isolate CHA chromosome (-) - - hcp1 expression and secretion (↑)
REG0333 experimental rsmA T6SS01269 experimental protein RsmA regulatory pathway Pseudomonas aeruginosa cystic fibrosis isolate CHA chromosome (-) - - hcp1 expression and secretion (↑)
REG0376 experimental PA3648 (bamA) T6SS00003 experimental protein Tpp Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 4085062..4087455 (-) NP_252338.1 ClpV-GFP foci accumulate; H1-T6SS transcript (↑)
REG0377 experimental PA0595 (lptD) T6SS00003 experimental protein Tpp Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 653753..656527 (-) NP_249286.1 ClpV-GFP foci accumulate; H1-T6SS transcript (↑)
REG0378 experimental PA0972 (tolB) T6SS00003 experimental protein Tpp Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 1056049..1057347 (+) NP_249663.1 ClpV-GFP foci accumulate; H1-T6SS transcript (↑)

experimental Experimental investigation has been performed.
insolico Bioinformatics investigation has been performed
Effector ID Locus tag (Gene) Classification Cognate immunity protein Related T6SS Organism                 Replicon (Accession) Coordinates (Strand) NCBI ID
EFF01474 experimental PFL_6096 (rhsA) Tde IMU00300 experimental T6SS00035 experimental Pseudomonas protegens Pf-5 chromosome (NC_004129) 6925413..6929873 (+) 68347678
EFF01038 experimental PA14_01140 (Tas1) Tas IMU00310 experimental T6SS00150 experimental Pseudomonas aeruginosa UCBPP-PA14 chromosome (NC_008463) 111195..112577 (-) 116053814
EFF01496 experimental PA0262 (VgrG2b) Tpe IMU00315 experimental T6SS00004 experimental Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 293802..296861 (-) 15595459
EFF01466 experimental PA2374 Tie - T6SS00005 experimental Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 2626221..2626757 (+) 15597570
EFF01823 experimental PA4922 (Azu) Tie - T6SS00004 experimental Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 5521664..5522110 (-) 15600115
EFF00014 experimental PA1844 (Tse1, Tae1) Tae IMU00190 experimental T6SS00003 experimental Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 2003868..2004332 (-) 15597041
EFF00045 experimental PFL_5498 (Tae3) Tae IMU00073 experimental T6SS00035 experimental Pseudomonas protegens Pf-5 chromosome (NC_004129) 6278373..6278744 (+) 70732799
EFF01870 experimental PA0807 (AmpDh3) Tae IMU00360 experimental T6SS00004 experimental Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 884799..885566 (+) 15596004
EFF01318 experimental PA0099 (Tse7) Tde IMU00333 experimental T6SS00003 experimental Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 120164..121324 (+) 15595297
EFF01482 experimental PA3907 (TseT) Tde IMU00309 experimental T6SS00005 experimental Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 4375230..4376015 (+) 15599102
EFF01816 experimental PA14_01200 (Tse7) Tde - T6SS00150 experimental Pseudomonas aeruginosa UCBPP-PA14 chromosome (NC_008463) 118146..119237 (+) 489228633
EFF01838 experimental PP_3108 (Tke2) Tde IMU00355 experimental T6SS00014 experimental Pseudomonas putida KT2440 chromosome (NC_002947) 3511333..3515490 (+) 499256461
EFF00017 experimental PA3484 (Tse3, Tge1) Tge IMU00191 experimental T6SS00003 experimental Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 3898278..3899504 (+) 15598680
EFF00434 experimental PFL_3037 (Tge2) Tge IMU00074 experimental T6SS00035 experimental Pseudomonas protegens Pf-5 chromosome (NC_004129) 3502760..3503293 (-) 70730402
EFF01889 experimental PA1863 (ModA) Tie - T6SS00004 experimental Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 2022411..2023166 (-) 15597060
EFF00019 experimental PA3487 (Tle5) Tle IMU00080 experimental T6SS00004 experimental Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 3902663..3905962 (+) 15598683
EFF01450 experimental PA0260 Tle IMU00315 experimental T6SS00004 experimental Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 291154..293304 (-) 15595457
EFF01463 experimental PA1510 Tle IMU00314 experimental T6SS00004 experimental Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 1639791..1641500 (-) 15596707
EFF01279 experimental PA5089 (PldB) Tle IMU00044 experimental; IMU00045 experimental; IMU00046 experimental T6SS00005 experimental Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 5727239..5729476 (-) 15600282
EFF01475 experimental PFL_6209 (Tne2) Tne IMU00301 experimental T6SS00035 experimental Pseudomonas protegens Pf-5 chromosome (NC_004129) 7049182..7050408 (+) 68347791
EFF01890 experimental AA098_13375 (TseN) Tne IMU00381 experimental T6SS01297 experimental Pseudomonas sp. JY-Q chromosome (NZ_CP011525) 2938691..2939623 (-) 939342945
EFF01891 experimental PA0822 (TseV) Tne IMU00382 experimental T6SS00004 experimental Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 898440..898886 (-) -
EFF01817 experimental PA14_03220 (VgrG2b) Tpe - T6SS00151 experimental Pseudomonas aeruginosa UCBPP-PA14 chromosome (NC_008463) 285213..288272 (-) 489228784
EFF00016 experimental PA2702 (Tse2) Tse IMU00107 experimental T6SS00003 experimental Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 3056890..3057366 (+) 15597898
EFF01037 experimental PA2774 (Tse4) Tse IMU00274 experimental T6SS00003 experimental Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 3132229..3132816 (-) 15597970
EFF01036 experimental PA2684 (Tse5) Tse - T6SS00003 experimental Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 3031749..3035702 (-) 15597880
EFF01035 experimental PA0093 (Tse6) Tse IMU00273 experimental T6SS00003 experimental Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 113303..114595 (-) 15595291
EFF01892 experimental PA2066 Tse - T6SS00004 experimental Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 2265126..2265764 (-) 15597262
EFF01893 experimental PA2056 Tse - T6SS00005 experimental Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 2249693..2250595 (+) 15597252
EFF00009 experimental PA0085 - - T6SS00003 experimental Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 103350..103838 (+) 15595283
EFF00010 experimental PA0091 - - T6SS00003 experimental Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 110976..112907 (+) 15595289
EFF00011 experimental PA0095 - - T6SS00003 experimental Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 115299..117524 (+) 15595293
EFF00015 experimental PA2685 - - T6SS00003 experimental Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 3035752..3037932 (-) 15597881
EFF00012 experimental PA0263 (hcp2) - - T6SS00004 experimental Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 297043..297561 (-) 15595460
EFF00059 experimental PSPTO_RS28130 - - T6SS00042 experimental Pseudomonas syringae pv. tomato str. DC3000 chromosome (NC_004578) 6181106..6181624 (+) 28872543
EFF00961 experimental PSYR_RS25780 - - T6SS00086 experimental Pseudomonas syringae pv. syringae B728a chromosome (NC_007005) 5889737..5890255 (+) 66048189
EFF00183 experimental PA14_01030 (hcp1) - - T6SS00150 experimental Pseudomonas aeruginosa UCBPP-PA14 chromosome (NC_008463) 101003..101491 (+) 489174134
EFF00186 experimental PA14_03240 (hcp2) - - T6SS00152 experimental Pseudomonas aeruginosa UCBPP-PA14 chromosome (NC_008463) 288454..288972 (-) 116053976
EFF01822 experimental PA14_34030 (hcp3) - - T6SS00151 experimental Pseudomonas aeruginosa UCBPP-PA14 chromosome (NC_008463) 3027086..3027583 (-) 489180008
EFF01837 experimental PP_3089 (hcp1) - - T6SS00014 experimental Pseudomonas putida KT2440 chromosome (NC_002947) 3478061..3478579 (-) 898330886
EFF76635 experimental PA0824 (PAAR2) - - T6SS00004 experimental Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 899138..899656 (-) NP_249515.1
EFF76642 experimental Y880_RS19070 (tse8) Tae IMU38215 experimental T6SS01213 experimental Pseudomonas aeruginosa PAK chromosome (NZ_CP020659) 3986374..3988083 (+) WP_003101313.1
EFF76643 experimental Y880_RS06360 (tse1) Tae IMU38216 experimental T6SS01213 experimental Pseudomonas aeruginosa PAK chromosome (NZ_CP020659) 1318816..1319280 (-) WP_016253554.1
EFF76644 experimental Y880_RS10940 (tse2) Tse IMU38217 experimental T6SS01213 experimental Pseudomonas aeruginosa PAK chromosome (NZ_CP020659) 2330486..2330962 (+) WP_003119469.1
EFF76645 experimental Y880_RS15550 (tse3) Tge IMU38218 experimental T6SS01213 experimental Pseudomonas aeruginosa PAK chromosome (NZ_CP020659) 3243308..3244534 (+) WP_003092026.1
EFF76646 experimental Y880_RS11390 (tse4) Tse IMU38219 experimental T6SS01213 experimental Pseudomonas aeruginosa PAK chromosome (NZ_CP020659) 2409831..2410418 (-) WP_003099160.1
EFF76647 experimental Y880_RS10855 (tse5) Tse IMU38220 experimental T6SS01213 experimental Pseudomonas aeruginosa PAK chromosome (NZ_CP020659) 2306683..2310636 (-) WP_016253337.1

experimental Experimental investigation has been performed.
insolico Bioinformatics investigation has been performed
Immunity protein ID Locus tag (Gene) Related T6SS Organism                 Replicon (Accession) Coordinates (Strand) Protein GI Cognate effector
IMU00044 experimental PA5086 T6SS00005 experimental Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 5724601..5725242 (-) 15600279 EFF01279 experimental
IMU00045 experimental PA5087 T6SS00005 experimental Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 5725479..5726348 (-) 15600280 EFF01279 experimental
IMU00046 experimental PA5088 T6SS00005 experimental Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 5726357..5727238 (-) 15600281 EFF01279 experimental
IMU00073 experimental PFL_5499 (Tai3) T6SS00035 experimental Pseudomonas protegens Pf-5 chromosome (NC_004129) 6278755..6279204 (+) 70732800 EFF00045 experimental
IMU00074 experimental PFL_3036 (Tgi2) T6SS00035 experimental Pseudomonas protegens Pf-5 chromosome (NC_004129) 3502296..3502766 (-) 70730401 EFF00434 experimental
IMU00080 experimental PA3488 (Tli5) T6SS00004 experimental Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 3906391..3907089 (+) 15598684 EFF00019 experimental
IMU00107 experimental PA2703 (Tsi2) T6SS00003 experimental Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 3057376..3057609 (+) 15597899 EFF00016 experimental
IMU00190 experimental PA1845 (Tsi1,Tai1) T6SS00003 experimental Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 2004374..2004892 (-) 15597042 EFF00014 experimental
IMU00191 experimental PA3485 (Tsi3,Tgi1) T6SS00003 experimental Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 3899501..3899938 (+) 15598681 EFF00017 experimental
IMU00273 experimental PA0092 (Tsi6) T6SS00003 experimental Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 113022..113306 (-) 15595290 EFF01035 experimental
IMU00274 experimental PA2775 (Tsi4) T6SS00003 experimental Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 3132821..3133258 (-) 15597971 EFF01037 experimental
IMU00284 experimental PA2684.1 (Tsi5) T6SS00003 experimental Pseudomonas aeruginosa PAO1 chromosome (NC_002516) - -
IMU00300 experimental PFL_6097 (rhsI) T6SS00035 experimental Pseudomonas protegens Pf-5 chromosome (NC_004129) 6929889..6930515 (+) 70733380 EFF01474 experimental
IMU00301 experimental PFL_6210 (Tni2) T6SS00035 experimental Pseudomonas protegens Pf-5 chromosome (NC_004129) 7050414..7050875 (+) 70733493 EFF01475 experimental
IMU00309 experimental PA3908 T6SS00005 experimental Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 4376012..4376731 (+) 15599103 EFF01482 experimental
IMU00310 experimental PA14_01130 (Tis1) T6SS00150 experimental Pseudomonas aeruginosa UCBPP-PA14 chromosome (NC_008463) 110972..111205 (-) 489174153 EFF01038 experimental
IMU00314 experimental PA1509 (TplEi) T6SS00004 experimental Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 1638652..1639794 (-) 15596706 EFF01463 experimental
IMU00315 experimental PA0261 (Tli3) T6SS00004 experimental Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 293301..293798 (-) 15595458 EFF01450; EFF01496 insolico; EFF01450; EFF01496 insolico
IMU00331 experimental PPUTGB1_RS14045 (Tri1) T6SS00252 insolico Pseudomonas putida GB-1 chromosome (NC_010322) 3096203..3097318 (-) 501229376 EFF01495 experimental
IMU00332 experimental KKK_RS13285 (Tri1) - Pseudomonas putida B6-2 chromosome (NZ_CP015202) 2922386..2923501 (-) 657294452 EFF01495 experimental
IMU00333 experimental PA0100 (Tsi7) T6SS00003 experimental Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 121346..122266 (+) 15595299 EFF01318 experimental
IMU00355 experimental PP_5576 (Tki2) T6SS00014 experimental Pseudomonas putida KT2440 chromosome (NC_002947) 3515484..3515960 (+) 898330862 EFF01838 experimental
IMU00360 experimental PA0808 T6SS00003 experimental Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 885635..886108 (+) 15596005 EFF01870 experimental
IMU00381 experimental AA098_13370 (TsiN) T6SS01297 experimental Pseudomonas sp. JY-Q chromosome (NZ_CP011525) 2938398..2938694 (-) 489341217 EFF01890 experimental
IMU00382 experimental PA0821 (TsiV) T6SS00003 experimental Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 897335..898423 (-) 15596018 EFF01891 experimental
IMU38215 experimental Y880_RS19075 (tsi8) T6SS01213 experimental Pseudomonas aeruginosa PAK chromosome (NZ_CP020659) 3988145..3988471 (+) WP_003093540.1 EFF76642 experimental
IMU38216 experimental Y880_RS06365 (tsi1) T6SS01213 experimental Pseudomonas aeruginosa PAK chromosome (NZ_CP020659) 1319322..1320002 (-) WP_174243846.1 EFF76643 experimental
IMU38217 experimental Y880_RS10945 (tsi2) T6SS01213 experimental Pseudomonas aeruginosa PAK chromosome (NZ_CP020659) 2330972..2331205 (+) WP_003114383.1 EFF76644 experimental
IMU38218 experimental Y880_RS15555 (tsi3) T6SS01213 experimental Pseudomonas aeruginosa PAK chromosome (NZ_CP020659) 3244531..3244968 (+) WP_003113900.1 EFF76645 experimental
IMU38219 experimental Y880_RS11395 (tsi4) T6SS01213 experimental Pseudomonas aeruginosa PAK chromosome (NZ_CP020659) 2410423..2410860 (-) WP_003099162.1 EFF76646 experimental
IMU38220 experimental Y880_RS10850 (tsi5) T6SS01213 experimental Pseudomonas aeruginosa PAK chromosome (NZ_CP020659) 2306495..2306686 (-) WP_003090543.1 EFF76647 experimental

experimental Experimental investigation has been performed.
insolico Bioinformatics investigation has been performed
ID           Locus tag (Gene) Organism                 Replicon (Accession) Coordinates (Strand) Protein GI Response to T6SS attack Known or putative function
RSF000020 experimental PA1326 (ilvA2) Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 1437067..1438614 (+) 15596523 protective amino acid biosynthesis
RSF000021 experimental PA4804 Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 5388702..5390099 (-) 15599998 protective a putative amino acid permease PA4804
RSF000022 experimental PA0867 (mliC) Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 948776..949159 (+) 15596064 protective a membrane-bound lysozyme inhibitor
RSF000023 experimental PA2824 (sagS) Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 3177090..3179450 (+) 15598020 protective a biofilm sensor/regulator
RSF000024 experimental PA3714 Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 4160329..4160970 (+) 15598909 protective a putative RcsB-like regulator
RSF000025 experimental PA4739 (osmY) Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 5322757..5323101 (-) 15599933 protective a predicted osmotic stress resistance
RSF000026 experimental PA4410 (ddlB) Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 4942677..4943636 (-) 15599606 protective D-alanine--D-alanine ligase

experimental Experimental investigation has been performed.
insolico Bioinformatics investigation has been performed
Accessory protein ID Locus tag (Gene) Related T6SS Type             Organism                 Replicon (Accession) Coordinates (Strand) Protein GI Related structure protein Related effector
ACP00002 experimental PA0094 (eagT6) T6SS00003 experimental adaptor Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 114611..115045 (-) 15595292 - PA0093 (Tse6)
ACP00003 experimental PA0086 (tagJ) T6SS00003 experimental structure affiliated protein Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 104006..104851 (+) 15595284 PA0082 (TssA) -
ACP00004 experimental PA0086 (tagJ) T6SS00003 experimental structure affiliated protein Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 104006..104851 (+) 15595284 PA0083 (HisB1/TssB1) -
ACP00005 experimental PA0259 (tla3) T6SS00004 experimental adaptor Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 289562..291004 (-) 15595456 PA0262 (VgrG2b) PA0260 (Tle3)
ACP00006 experimental PA3906 (co-TecT) T6SS00005 experimental chaperone Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 4374850..4375233 (+) 15599101 PA3905 (TecT) -
ACP00007 experimental PA3905 (tecT) T6SS00005 experimental chaperone Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 4374330..4374857 (+) 15599100 PA3904 (PAAR4) PA3907 (TseT)
ACP00008 experimental PA3790 (oprC) T6SS00005 experimental chaperone Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 4247703..4249874 (-) 15598985 - PA4922 (Azu)
ACP00009 experimental PP_RS16060 (tagB1) T6SS00014 experimental structure affiliated protein Pseudomonas putida KT2440 chromosome (NC_002947) 3496832..3497581 (-) 898330878 PP_RS15990 (TssA) -
ACP00012 experimental PFL_6095 (eagR1) T6SS00035 experimental adaptor Pseudomonas protegens Pf-5 chromosome (NC_004129) 6924978..6925403 (+) 499376685 - PFL_6096 (RhsA)
ACP00013 experimental PFL_6099 (eagT2) T6SS00035 experimental adaptor Pseudomonas protegens Pf-5 chromosome (NC_004129) 6930853..6931287 (-) 499376689 - PFL_6209 (Tne2)
ACP00043 experimental PA4370 (IcmP) T6SS00004 experimental chaperone Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 4898193..4899533 (+) 15599566 - PA1863 (ModA)
ACP00044 experimental PA1862 (ModB) T6SS00004 experimental chaperone Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 2021712..2022398 (-) 15597059 - PA1863 (ModA)
ACP00045 experimental PA1861 (ModC) T6SS00004 experimental chaperone Pseudomonas aeruginosa PAO1 chromosome (NC_002516) 2020625..2021710 (-) 15597058 - PA1863 (ModA)