Detailed information of immunity protein


Summary

Immunity protein ID IMU00191 experimental
Cognate effector EFF00017 experimental
Related T6SS (Type) T6SS00003 experimental (Type i3)
Strain Pseudomonas aeruginosa PAO1
Replicon chromosome
Sequence Protein sequence (146 a.a.); Nucleotide sequence (438 bp)
Description Tsi3
Reference
-
experimental Experimental investigation has been performed.
insolico Bioinformatics investigation has been performed

External database links

Locus tag (Gene) PA3485 (Tsi3,Tgi1)
Coordinates (Strand) 3899501..3899938 (+)
NCBI ID 15598681
RefSeq NC_002516
Uniprot ID TSI3_PSEAE
KEGG ID pae:PA3485
PDB ID 4N88, 3WA5, 4LUQ, 4N7S, 4N80, 4M5F

Pfam domain hit(s)

Domain Pfam ID E-value Aligned region

Transmembrane helices

  • Transmembrane helices are predicted using TMHMM 2.0 software.

Prediction                 Region     Sequence
Outside 1-145 MKTVALILASLALLACTAESGVDFDKTLTHPNGLVVERPVGFDARRSAEGFRFDEGGKLRNPRQLEVQRQDAPPPPDLASRRLGDGEARYKVEEDDGGSAGSEYRLWAAKPAGARWIVVSASEQSEDGEPTFALAWALLERARLQ



Signal peptides
  • Sec/SPI: "standard" secretory signal peptides transported by the Sec translocon and cleaved by Signal Peptidase I (Lep).
  • Sec/SPII: lipoprotein signal peptides transported by the Sec translocon and cleaved by Signal Peptidase II (Lsp).
  • Tat/SPI: Tat signal peptides transported by the Tat translocon and cleaved by Signal Peptidase I (Lep).
Prediction        Probability Cleavage site Signal peptide sequence
LIPO(Sec/SPII) 0.9873 pos: 15-16. LLA-CT. MKTVALILASLALLA



  Protein sequence: 146 a.a.    .

>IMU00191 NC_002516:3899501-3899938 [Pseudomonas aeruginosa PAO1]
MKTVALILASLALLACTAESGVDFDKTLTHPNGLVVERPVGFDARRSAEGFRFDEGGKLRNPRQLEVQRQDAPPPPDLAS
RRLGDGEARYKVEEDDGGSAGSEYRLWAAKPAGARWIVVSASEQSEDGEPTFALAWALLERARLQ*

  Nucleotide sequence: 438 bp    .

>IMU00191 NC_002516:3899501-3899938 [Pseudomonas aeruginosa PAO1]
ATGAAGACAGTCGCCCTGATTCTCGCCAGCCTCGCCCTGCTGGCCTGCACCGCGGAGTCCGGGGTGGACTTCGACAAGAC
CCTGACCCACCCGAACGGCCTGGTGGTGGAGCGCCCCGTCGGCTTCGACGCGCGGCGCAGCGCCGAGGGCTTCCGCTTCG
ACGAAGGCGGCAAGCTGCGCAACCCACGCCAACTGGAGGTCCAGCGCCAGGACGCGCCGCCCCCGCCCGACCTGGCGAGC
AGGCGCCTGGGCGACGGCGAGGCGCGCTACAAGGTAGAGGAAGACGACGGCGGCTCCGCCGGCAGCGAATACCGCCTGTG
GGCAGCCAAGCCGGCGGGCGCGCGGTGGATCGTGGTCAGCGCCAGCGAGCAGAGCGAGGATGGCGAACCGACCTTCGCCC
TGGCCTGGGCGCTGCTGGAGCGGGCCAGGTTGCAATAG