T6SS-related protein prediction

In this page, users can paste or upload their DNA or protein sequences, then perform BLAST (NCBI BLAST 2.10.1+) or hmmsearch (HMMER v3.3.1) against effectors, immunity proteins, component proteins, regulators and accessory proteins recorded in SecReT6.


Note: Single sequence and multiple sequences are both acceptable.

Input Your Sequence

        Example: example.fas


Protein FASTA file


Set Parameters

Select tools
    


Select the types of T6SS-related proteins to perform search
    


E-value threshold <
Blast Ha-value threshold > (0~1)