T6SS Classification

T6SS gene cluster type


SecReT6 has classified T6SSs into four types, type i, ii, iii and iv, by employing the schemes proposed by Barret et al. (Microbiology, 2007; Environ Microbiol Rep, 2013) and Russell et al. (Cell Host Microbe, 2014). Type i system in turn contains six subtypes (i1, i2, i3, i4a, i4b and i5), while the type ii class is uniquely populated by the Francisella pathogenicity island-encoded system, leading to this group being also known as type ii. The type iii class is identified in Bacteroidetes. Indeed, our phylogenetic analysis of 825 proteins assigned as the TssB (VipA or IglA) component matches the above described classification scheme, suggesting that TssB alone may be a suitable classification marker once appropriate quantitative phylogenetic criteria are established.

Statistics


Only experimentally validated T6SSs are counted.

Created with Highcharts 9.0.1Chart context menuType i: 168Type i: 168Type i1: 55Type i1: 55Type i2: 14Type i2: 14Type i3: 42Type i3: 42Type i4a: 7Type i4a: 7Type i4b: 29Type i4b: 29Type i5: 21Type i5: 21Type ii (Type FPI): 5Type ii (Type FPI): 5Type iii: 6Type iii: 6Type iv: 2Type iv: 2
Type No. of T6SSs Subtype No. of T6SSs
168
55
14
42
7
29
21
5
-
-
6
-
-
2
-
-