Detailed information of immunity protein


Summary

Immunity protein ID IMU00107 experimental
Cognate effector EFF00016 experimental
Related T6SS (Type) T6SS00003 experimental (Type i3)
Strain Pseudomonas aeruginosa PAO1
Replicon chromosome
Sequence Protein sequence (78 a.a.); Nucleotide sequence (234 bp)
Description Tsi2
Reference
-
experimental Experimental investigation has been performed.
insolico Bioinformatics investigation has been performed
External database links

Locus tag (Gene) PA2703 (Tsi2)
Coordinates (Strand) 3057376..3057609 (+)
NCBI ID 15597899
RefSeq NC_002516
Uniprot ID TSI2_PSEAE
KEGG ID pae:PA2703
PDB ID 3VPV, 4C18, 3RQ9, 5AKO, 3STQ
Pfam domain hit(s)

Domain Pfam ID E-value Aligned region
Transmembrane helices

  • Transmembrane helices are predicted using TMHMM 2.0 software.

Prediction                 Region     Sequence
Outside 1-77 MNLKPQTLMVAIQCVAARTRELDAQLQNDDPQNAAELEQLLVGYDLAADDLKNAYEQALGQYSGLPPYDRLIEEPAS


Signal peptides
  • Sec/SPI: "standard" secretory signal peptides transported by the Sec translocon and cleaved by Signal Peptidase I (Lep).
  • Sec/SPII: lipoprotein signal peptides transported by the Sec translocon and cleaved by Signal Peptidase II (Lsp).
  • Tat/SPI: Tat signal peptides transported by the Tat translocon and cleaved by Signal Peptidase I (Lep).
Prediction        Probability Cleavage site Signal peptide sequence
Other 0.6273 - -


  Protein sequence: 78 a.a.    .

>IMU00107 NC_002516:3057376-3057609 [Pseudomonas aeruginosa PAO1]
MNLKPQTLMVAIQCVAARTRELDAQLQNDDPQNAAELEQLLVGYDLAADDLKNAYEQALGQYSGLPPYDRLIEEPAS*

  Nucleotide sequence: 234 bp    .

>IMU00107 NC_002516:3057376-3057609 [Pseudomonas aeruginosa PAO1]
ATGAACCTGAAACCCCAGACCCTGATGGTGGCGATCCAGTGCGTCGCCGCGCGCACCCGCGAACTCGACGCGCAGTTGCA
GAACGACGACCCGCAGAACGCCGCTGAACTCGAACAGTTGCTGGTCGGCTACGACCTCGCCGCCGACGACCTGAAGAACG
CCTACGAGCAAGCCCTGGGCCAATACAGCGGCCTGCCGCCCTATGACCGGCTGATCGAAGAGCCGGCATCCTGA