Detailed information of immunity protein


Summary

Immunity protein ID IMU00274 experimental
Cognate effector EFF01037 experimental
Related T6SS (Type) T6SS00003 experimental (Type i3)
Strain Pseudomonas aeruginosa PAO1
Replicon chromosome
Sequence Protein sequence (146 a.a.); Nucleotide sequence (438 bp)
Description Tsi4
Reference
-
experimental Experimental investigation has been performed.
insolico Bioinformatics investigation has been performed
External database links

Locus tag (Gene) PA2775 (Tsi4)
Coordinates (Strand) 3132821..3133258 (-)
NCBI ID 15597971
RefSeq NC_002516
Uniprot ID TSI4_PSEAE
KEGG ID pae:PA2775
PDB ID -
Pfam domain hit(s)

Loading, please wait
Domain
Pfam ID
E-value
Aligned region
DUF3592PF12158.101.1e-159..133
Showing 1 to 1 of 1 rows
Transmembrane helices

  • Transmembrane helices are predicted using TMHMM 2.0 software.

Loading, please wait
Prediction                
Region    
Sequence
Inside1-8MTTSSGSR
Transmembrane helix9-31IGGLLHASLFSLLGLGLLLAGGF
Outside32-106KTVERYHFLRTAQEAQGTVSALNAGGSHPQIDFTSVSGERISYPQGGFIFGYQVGEPVRVLYEAGRPAASAIVDD
Transmembrane helix107-129AGALWGTGAFLCGFGALFGIVGF
Inside130-145RGLLGLRSSQPTSKGH


Signal peptides
  • Sec/SPI: "standard" secretory signal peptides transported by the Sec translocon and cleaved by Signal Peptidase I (Lep).
  • Sec/SPII: lipoprotein signal peptides transported by the Sec translocon and cleaved by Signal Peptidase II (Lsp).
  • Tat/SPI: Tat signal peptides transported by the Tat translocon and cleaved by Signal Peptidase I (Lep).
Loading, please wait
Prediction       
Probability
Cleavage site
Signal peptide sequence
Other0.7578--


  Protein sequence: 146 a.a.    .

>IMU00274 NC_002516:c3133258-3132821 [Pseudomonas aeruginosa PAO1]
MTTSSGSRIGGLLHASLFSLLGLGLLLAGGFKTVERYHFLRTAQEAQGTVSALNAGGSHPQIDFTSVSGERISYPQGGFI
FGYQVGEPVRVLYEAGRPAASAIVDDAGALWGTGAFLCGFGALFGIVGFRGLLGLRSSQPTSKGH*

  Nucleotide sequence: 438 bp    .

>IMU00274 NC_002516:c3133258-3132821 [Pseudomonas aeruginosa PAO1]
ATGACGACCTCTTCCGGTTCGCGTATCGGCGGACTTCTTCACGCTTCCCTTTTTTCCCTGCTCGGACTCGGTCTCCTGCT
CGCCGGCGGTTTCAAGACCGTCGAGCGGTACCATTTCCTGCGTACTGCGCAGGAAGCCCAGGGGACGGTCAGCGCCTTGA
ATGCCGGCGGTTCGCATCCGCAGATCGATTTCACCAGCGTTTCCGGCGAGCGGATTTCCTATCCCCAGGGCGGCTTCATC
TTCGGCTACCAGGTGGGCGAGCCGGTTCGCGTCCTCTACGAGGCTGGGCGGCCGGCGGCCAGCGCGATAGTCGACGATGC
CGGCGCGCTCTGGGGAACCGGCGCTTTCCTCTGCGGCTTCGGCGCACTCTTCGGTATTGTCGGGTTCAGGGGATTGCTGG
GCCTGCGTTCTTCCCAACCGACCTCAAAAGGACATTGA