Detailed information of immunity protein


Summary

Immunity protein ID IMU00310 experimental
Cognate effector EFF01038 experimental
Related T6SS (Type) T6SS00150 experimental (Type i3)
Strain Pseudomonas aeruginosa UCBPP-PA14
Replicon chromosome
Sequence Protein sequence (78 a.a.); Nucleotide sequence (234 bp)
Description PA14_01130 is its cognate immunity protein of PA14_01140(Tas1)
Reference
experimental Experimental investigation has been performed.
insolico Bioinformatics investigation has been performed
External database links

Locus tag (Gene) PA14_01130 (Tis1)
Coordinates (Strand) 110972..111205 (-)
NCBI ID 489174153
RefSeq NC_008463
Uniprot ID V6A7V3_PSEAI, TIS1_PSEAB, A0A090A233_PSEAI
KEGG ID pau:PA14_01130
PDB ID 6OX6
Pfam domain hit(s)

Domain Pfam ID E-value Aligned region
Transmembrane helices

  • Transmembrane helices are predicted using TMHMM 2.0 software.

Prediction                 Region     Sequence
Outside 1-77 MAIEKGEAFARRDIYIDYDFEDVTYRWDHRQGTIHVRFYGEAESPEPVEHDNRLFNDALRFGREITREEYETGFPKG


Signal peptides
  • Sec/SPI: "standard" secretory signal peptides transported by the Sec translocon and cleaved by Signal Peptidase I (Lep).
  • Sec/SPII: lipoprotein signal peptides transported by the Sec translocon and cleaved by Signal Peptidase II (Lsp).
  • Tat/SPI: Tat signal peptides transported by the Tat translocon and cleaved by Signal Peptidase I (Lep).
Prediction        Probability Cleavage site Signal peptide sequence
Other 0.9961 - -


  Protein sequence: 78 a.a.    .

>IMU00310 NC_008463:c111205-110972 [Pseudomonas aeruginosa UCBPP-PA14]
MAIEKGEAFARRDIYIDYDFEDVTYRWDHRQGTIHVRFYGEAESPEPVEHDNRLFNDALRFGREITREEYETGFPKG*

  Nucleotide sequence: 234 bp    .

>IMU00310 NC_008463:c111205-110972 [Pseudomonas aeruginosa UCBPP-PA14]
ATGGCAATTGAAAAGGGCGAAGCGTTCGCCAGGCGCGATATCTACATCGACTACGACTTCGAAGACGTCACCTACCGCTG
GGACCATCGGCAGGGCACGATCCACGTGCGCTTCTACGGCGAAGCCGAATCCCCCGAGCCGGTTGAGCACGACAACCGCC
TGTTCAACGATGCGCTGCGTTTCGGCCGGGAAATCACCCGCGAGGAGTACGAGACGGGCTTTCCCAAGGGCTGA