Detailed information of immunity protein


Summary

Immunity protein ID IMU38217 experimental
Cognate effector EFF76644 experimental
Related T6SS (Type) T6SS01213 experimental (Type i3)
Strain Pseudomonas aeruginosa PAK
Replicon chromosome
Sequence Protein sequence (78 a.a.); Nucleotide sequence (234 bp)
Description -
Reference
experimental Experimental investigation has been performed.
insolico Bioinformatics investigation has been performed
External database links

Locus tag (Gene) Y880_RS10945 (tsi2)
Coordinates (Strand) 2330972..2331205 (+)
NCBI ID WP_003114383.1
RefSeq NZ_CP020659
Uniprot ID A0A1F0J6S8_9PSED, TSI2_PSEAE, A0A072ZQY3_PSEAI, A0A448BJQ8_PSEFL
KEGG ID pae:PA2703
PDB ID 3VPV, 4C18, 3RQ9, 5AKO, 3STQ
Pfam domain hit(s)

Domain Pfam ID E-value Aligned region
Transmembrane helices

  • Transmembrane helices are predicted using TMHMM 2.0 software.

Prediction                 Region     Sequence
Outside 1-77 MNLKPQTLMVAIQCVAARTRELDAQLQNDDPQNAAELEQLLVGYDLAADDLKNAYEQALGQYSGLPPYDRLIEEPAS


Signal peptides
  • Sec/SPI: "standard" secretory signal peptides transported by the Sec translocon and cleaved by Signal Peptidase I (Lep).
  • Sec/SPII: lipoprotein signal peptides transported by the Sec translocon and cleaved by Signal Peptidase II (Lsp).
  • Tat/SPI: Tat signal peptides transported by the Tat translocon and cleaved by Signal Peptidase I (Lep).
Prediction        Probability Cleavage site Signal peptide sequence
Other 0.6273 - -


  Protein sequence: 78 a.a.    .

>IMU38217 NZ_CP020659:2330972-2331205 [Pseudomonas aeruginosa PAK]
MNLKPQTLMVAIQCVAARTRELDAQLQNDDPQNAAELEQLLVGYDLAADDLKNAYEQALGQYSGLPPYDRLIEEPAS*

  Nucleotide sequence: 234 bp    .

>IMU38217 NZ_CP020659:2330972-2331205 [Pseudomonas aeruginosa PAK]
ATGAACCTGAAACCCCAGACCCTGATGGTGGCGATCCAGTGCGTCGCCGCGCGCACCCGCGAACTCGACGCGCAGTTGCA
GAACGACGACCCGCAGAACGCCGCTGAACTCGAACAGTTGCTGGTCGGCTACGACCTCGCCGCCGACGACCTGAAGAACG
CCTACGAGCAAGCCCTGGGCCAATACAGCGGCCTGCCGCCCTATGACCGGCTGATCGAAGAGCCGGCATCCTGA