Detailed information of regulator

Summary

Regulator ID	REG0008
Regulator type	ncRNA
Regulatory pathway (from literatures)	RsmA regulatory pathway
KEGG pathway (determined by BlastKOALA)	-
Related T6SS	T6SS01211 (Type i1); T6SS01212 (Type i4a); T6SS01213 (Type i3)
Strain	Pseudomonas aeruginosa PAO1
Replicon	chromosome
Sequence	Nucleotide sequence (124 bp)
Description	The function of RsmA is antagonized by small RNAs RsmY and RsmZ.P.aeruginosa PAK use PAO1 gene annotation as RNA description; Deletion of gacA or rsmY/rsmZ reduced the level of Hcp1 in the suhB mutant background. In addition, overexpression of rsmA suppressed the expression of Hcp1 in the suhB mutant.
Reference	[1] Chen R, Weng Y, Zhu F, et al. Polynucleotide Phosphorylase Regulates Multiple Virulence Factors and the Stabilities of Small RNAs RsmY/Z in Pseudomonas aeruginosa. Front Microbiol. 2016 Mar 2;7:247. doi: 10.3389/fmicb.2016.00247. eCollection 2016. PMID: 26973625 [2] Li K, Xu C, Jin Y, et al. SuhB is a regulator of multiple virulence genes and essential for pathogenesis of Pseudomonas aeruginosa. mBio. 2013 Oct 29;4(6):e00419-13. doi: 10.1128/mBio.00419-13. PMID: 24169572

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External database links

Locus tag (Gene)	PA0527.1 (RsmY)
Coordinates (Strand)	586867..586990 (+)
NCBI ID	-
RefSeq	NZ_CP020659

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  Target

Target	Regulation (↓/↑)	Target sequence
RsmA (Y880_06257)	↓	-

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  Nucleotide sequence of regulator: 124 bp    .Download