Detailed information of TA system TA020089

Bioinformatically predicted

Overview

TA module

• Type: II
• Classification (family/domain): yjhX-yjhQ/-
• Location: 4419085..4419899
• Replicon: chromosome
• Accession: HG738867
• Organism: Escherichia coli str. K-12 substr. MC4100

Toxin (Protein)

• Gene name: yjhX
• Uniprot ID: -
• Locus tag: BN896_4006
• Protein ID: CDJ74525.1
• Coordinates: 4419642..4419899 (-)
• Length: 86 a.a.

Antitoxin (Protein)

• Gene name: yjhQ
• Uniprot ID: -
• Locus tag: BN896_4005
• Protein ID: CDJ74524.1
• Coordinates: 4419085..4419630 (-)
• Length: 182 a.a.

Genomic Context

Locus tag	Coordinates	Strand	Size (bp)	Protein ID	Product	Description
BN896_4001	4414776..4416089	-	1314	CDJ74520.1	KpLE2 phage-like element; putative phosphotransferase enzyme IIC component	-
BN896_4002	4416101..4416379	-	279	CDJ74521.1	putative enzyme IIB component of PTS	-
BN896_4003	4416376..4417497	-	1122	CDJ74522.1	putative endoglucanase with Zn-dependent exopeptidase domain protein	-
BN896_4004	4418283..4419029	-	747	CDJ74523.1	KpLE2 phage-like element; putative methyltransferase	-
BN896_4005	4419085..4419630	-	546	CDJ74524.1	KpLE2 phage-like element; putative acetyltransferase	Antitoxin
BN896_4006	4419642..4419899	-	258	CDJ74525.1	hypothetical protein	Toxin
BN896_4007	4422460..4423440	-	981	CDJ74526.1	hypothetical protein	-
BN896_4008	4423505..4424611	-	1107	CDJ74527.1	N-acetylneuraminic acid mutarotase	-

Associated MGEs

MGE detail	Similar MGEs	Relative position	MGE Type	Cargo ARG	Virulence gene	Coordinates	Length (bp)
	Similar MGE(s) Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE. Detail Genome accession Organism MGE type Related TA Coordinates Mash distance View NC_000913 Escherichia coli str. K-12 substr. MG1655 Genomic island TA006279 4533239..4545029 0.004 View NC_012759 Escherichia coli BW2952 Genomic island TA023876 4469997..4481537 0 View NC_017638 Escherichia coli DH1 Genomic island TA027426 4513009..4524807 0.004 View NZ_CP009273 Escherichia coli BW25113 Genomic island TA048705 4523056..4534846 0.004 View NC_007779 Escherichia coli str. K-12 substr. W3110 Genomic island TA021460 4537919..4549709 0.004 View NZ_CP017979 Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 Genomic island TA068445 4432698..4444488 0.004 View NZ_HG738867 Escherichia coli str. K-12 substr. MC4100 strain K-12 Genomic island TA285034 4419085..4430625 0 View NZ_AP022207 Escherichia coli strain WP7-S18-ESBL-09 Genomic island TA034931 4496613..4507640 0.007 View NZ_AP022650 Escherichia coli strain 09-02E Genomic island TA036473 4973972..4985762 0.005 View NZ_CP008801 Escherichia coli KLY Genomic island TA047531 4610098..4621888 0.004 View NZ_CP010140 Escherichia coli strain D3 Genomic island TA050699 365263..377053 0.005 View NZ_CP010440 Escherichia coli K-12 strain K-12 MG1655 Genomic island TA052489 652082..663872 0.004 View NZ_CP010443 Escherichia coli K-12 strain K-12 MG1655 Genomic island TA052612 650086..661876 0.004 View NZ_CP011320 Escherichia coli strain SQ37 Genomic island TA053866 4525048..4536838 0.004 View NZ_CP011321 Escherichia coli strain SQ88 Genomic island TA053909 4502468..4514258 0.004 View NZ_CP011322 Escherichia coli strain SQ110 Genomic island TA053952 4496722..4508512 0.004 View NZ_CP011324 Escherichia coli strain SQ2203 Genomic island TA053995 4496888..4508678 0.004 View NZ_CP011342 Escherichia coli K-12 substr. GM4792 Genomic island TA054080 4513929..4525719 0.004 View NZ_CP011343 Escherichia coli K-12 substr. GM4792 Genomic island TA054119 4513243..4525033 0.004 View NZ_CP011495 Escherichia coli strain NCM3722 isolate K-12 Genomic island TA054304 1110109..1121898 0.004 View NZ_CP012125 Escherichia coli strain DH1Ec095 Genomic island TA055862 4505801..4517600 0.004 View NZ_CP012126 Escherichia coli strain DH1Ec104 Genomic island TA055905 4503941..4515740 0.004 View NZ_CP012127 Escherichia coli strain DH1Ec169 Genomic island TA055948 4501100..4512899 0.004 View NZ_CP014225 Escherichia coli str. K-12 substr. MG1655 strain K-12 Genomic island TA060393 2730328..2742118 0.004 View NZ_CP014270 Escherichia coli K-12 strain K-12 DHB4 Genomic island TA060549 4438440..4450230 0.004 View NZ_CP014272 Escherichia coli K-12 strain K-12 C3026 Genomic island TA060601 4636842..4648632 0.004 View NZ_CP019629 Escherichia coli strain MGY Genomic island TA073098 4534837..4546627 0.004 View NZ_CP022229 Escherichia coli strain WCHEC96200 Genomic island TA078705 2761077..2772866 0.005 View NZ_CP023960 Escherichia coli strain FDAARGOS_448 Genomic island TA086478 2768858..2779885 0.007 View NZ_CP025268 Escherichia coli str. K-12 substr. MG1655 strain K-12 Genomic island TA090018 4535154..4546943 0.004 View NZ_CP025401 Escherichia coli strain MS8345 Genomic island TA090302 5077482..5089273 0.005 View NZ_CP026026 Escherichia coli strain CAR Genomic island TA092782 4436233..4448023 0.004 View NZ_CP026027 Escherichia coli strain LIM Genomic island TA092825 4516555..4528345 0.004 View NZ_CP026028 Escherichia coli strain CIT Genomic island TA092868 4531260..4543050 0.004 View NZ_CP026342 Escherichia coli strain 9FA Genomic island TA093883 4533239..4545029 0.004 View NZ_CP026343 Escherichia coli strain 9A Genomic island TA093926 4533234..4545024 0.004 View NZ_CP026344 Escherichia coli strain 8FA Genomic island TA093969 4533241..4545031 0.004 View NZ_CP026347 Escherichia coli strain 7A Genomic island TA094098 4533234..4545024 0.004 View NZ_CP026348 Escherichia coli strain 6FA Genomic island TA094141 4533240..4545030 0.004 View NZ_CP026349 Escherichia coli strain 6A Genomic island TA094184 4533185..4544975 0.004 View NZ_CP026350 Escherichia coli strain 5FA Genomic island TA094227 4533241..4545031 0.004 View NZ_CP026351 Escherichia coli strain 5A Genomic island TA094270 4533240..4545030 0.004 View NZ_CP026352 Escherichia coli strain 4FA Genomic island TA094313 4533241..4545031 0.004 View NZ_CP026353 Escherichia coli strain 4A Genomic island TA094356 4533241..4545031 0.004 View NZ_CP026355 Escherichia coli strain 3A Genomic island TA094442 4533241..4545031 0.004 View NZ_CP026356 Escherichia coli strain 2FA Genomic island TA094485 4533240..4545030 0.004 View NZ_CP026357 Escherichia coli strain 2F_0 Genomic island TA094528 4533240..4545030 0.004 View NZ_CP026359 Escherichia coli strain 2_0 Genomic island TA094614 4533240..4545030 0.004 View NZ_CP026360 Escherichia coli strain 1FA Genomic island TA094657 4533241..4545031 0.004 View NZ_CP026361 Escherichia coli strain 1A Genomic island TA094700 4533249..4545039 0.004 View NZ_CP026491 Escherichia coli strain HS13-1 Genomic island TA094988 3590775..3602566 0.005 View NZ_CP026612 Escherichia coli strain DTU-1 Genomic island TA095265 1584820..1596610 0.004 View NZ_CP028702 Escherichia coli strain J53 Genomic island TA102938 287975..299765 0.004 View NZ_CP028703 Escherichia coli strain ME8067 Genomic island TA102982 781226..794215 0.007 View NZ_CP028760 Escherichia coli strain A14 Genomic island TA103780 669746..681536 0.009 View NZ_CP029238 Escherichia coli strain CJ236 Genomic island TA105272 4533239..4545029 0.004 View NZ_CP030240 Escherichia coli strain ER1709 Genomic island TA107370 2096258..2108029 0.004 View NZ_CP032679 Escherichia coli str. K-12 substr. MG1655 strain K-12 Genomic island TA112129 4523130..4534920 0.004 View NZ_CP034658 Escherichia coli strain ATCC 98082 Genomic island TA116336 4505130..4516920 0.004 View NZ_CP040456 Escherichia coli strain UPEC132 Genomic island TA125864 4365455..4376484 0.006 View NZ_CP040643 Escherichia coli strain BE104 Genomic island TA126287 4666710..4678500 0.004 View NZ_CP040663 Escherichia coli strain EK2009 Genomic island TA126374 4496617..4508406 0.004 View NZ_CP040664 Escherichia coli strain KR2009 Genomic island TA126417 4493113..4504902 0.004 View NZ_CP042843 Escherichia coli strain JME67 Genomic island TA136070 602194..613984 0.004 View NZ_CP042844 Escherichia coli strain JME66 Genomic island TA136113 597313..609103 0.004 View NZ_CP042845 Escherichia coli strain JME65 Genomic island TA136156 602194..613984 0.004 View NZ_CP042846 Escherichia coli strain JME64 Genomic island TA136199 597313..609103 0.004 View NZ_CP043295 Escherichia coli strain WCHEC040047 Genomic island TA138271 1909583..1920610 0.007 View NZ_CP043950 Escherichia coli strain ST95-32 Genomic island TA139617 683687..695478 0.005 View NZ_CP044410 Escherichia coli strain ecMN1F Genomic island TA140872 598956..610746 0.004 View NZ_CP049196 Escherichia coli strain E118 Genomic island TA150918 3895947..3906974 0.007 View NZ_CP049197 Escherichia coli strain E597 Genomic island TA150946 3587909..3598936 0.007 View NZ_CP049198 Escherichia coli strain E686 Genomic island TA150973 3290150..3301176 0.007 View NZ_CP049839 Escherichia coli strain UPEC-455U/190220 Genomic island TA151641 574399..586189 0.005 View NZ_CP049852 Escherichia coli strain UPEC-774U/190308 Genomic island TA151708 575343..587133 0.005 View NZ_CP051719 Escherichia coli strain SCU-116 Genomic island TA155026 3571249..3583040 0.005 View NZ_CP053251 Escherichia coli strain SCU-204 Genomic island TA156417 1297780..1309569 0.005 View NZ_CP053605 Escherichia coli strain NEB_Turbo Genomic island TA157151 4421973..4434961 0.006 View NZ_CP053662 Escherichia coli strain eco-241 Genomic island TA157377 4500016..4512243 0.009 View NZ_CP054161 Escherichia coli strain STO_Bone2 Genomic island TA158811 234138..245165 0.007 View NZ_CP054214 Escherichia coli strain EcPF40 Genomic island TA158956 574039..585829 0.005 View NZ_CP054665 Escherichia coli strain IGC_EcoliInv_1.1 Genomic island TA160068 4585030..4596820 0.004 View NZ_CP056036 Escherichia coli strain EC31 Genomic island TA162541 4523017..4535244 0.009 View NZ_CP058948 Escherichia coli strain SY3626C5 Genomic island TA167983 287975..299765 0.004 View NZ_CP059043 Escherichia coli strain SY3626C1 Genomic island TA168111 287975..299765 0.004 View NZ_CP060953 Escherichia coli strain EC8 Genomic island TA171732 3513272..3525062 0.005 View NZ_CP062239 Escherichia coli strain AML001_ev03 Genomic island TA173668 4523056..4534846 0.004 View NZ_CP062240 Escherichia coli strain AML001_ev02 Genomic island TA173711 4524255..4536045 0.004 View NZ_CP062241 Escherichia coli strain AML001_ev01 Genomic island TA173754 4524255..4536045 0.004 View NZ_CP062242 Escherichia coli strain AML001_par Genomic island TA173797 4523056..4534846 0.004 View NZ_CP062244 Escherichia coli strain AML003_ev02 Genomic island TA173883 4523056..4534846 0.004 View NZ_CP062245 Escherichia coli strain AML003_ev01 Genomic island TA173926 4523055..4534845 0.004 View NZ_CP062246 Escherichia coli strain AML003_par Genomic island TA173969 4523056..4534846 0.004 View NZ_CP062247 Escherichia coli strain AML002_ev03 Genomic island TA174012 4524259..4536049 0.004 View NZ_CP062248 Escherichia coli strain AML002_ev02 Genomic island TA174055 4523057..4534847 0.004 View NZ_CP062249 Escherichia coli strain AML002_ev01 Genomic island TA174098 4524255..4536045 0.004 View NZ_CP062250 Escherichia coli strain AML002_par Genomic island TA174141 4523056..4534846 0.004 View NZ_CP064103 Escherichia coli strain IR53017 Genomic island TA180144 4502327..4513354 0.007 View NZ_CP064678 Escherichia coli K-12 strain CETR3G40 Genomic island TA181449 4523057..4534847 0.004 View NZ_CP064679 Escherichia coli K-12 strain CETR2G40 Genomic island TA181492 4523057..4534847 0.004 View NZ_CP064680 Escherichia coli K-12 strain CETR1G40 Genomic island TA181535 4523054..4534844 0.004 View NZ_CP064681 Escherichia coli K-12 strain BZKR3G40 Genomic island TA181578 4523062..4534853 0.004 View NZ_CP064682 Escherichia coli K-12 strain BZKR2G40 Genomic island TA181621 4523056..4534847 0.004 View NZ_CP066836 Escherichia coli strain Ec-FL1-1X Genomic island TA185155 2478774..2489802 0.007 View NZ_CP067299 Escherichia coli strain ABW_A33 Genomic island TA186000 505435..518424 0.007 View NZ_CP067303 Escherichia coli strain ABW_A32 Genomic island TA186032 505435..518424 0.007 View NZ_CP068279 Escherichia coli strain CY708 Genomic island TA186996 1045931..1057720 0.004 View NZ_CP068281 Escherichia coli strain CY706 Genomic island TA187037 1100073..1111862 0.004 View NZ_CP069132 Escherichia coli BW25113 substr. CHXR1G20 Genomic island TA189941 4523052..4534842 0.004 View NZ_CP069133 Escherichia coli BW25113 substr. CHXR2G20 Genomic island TA189984 4523056..4534846 0.004 View NZ_CP069528 Escherichia coli strain FDAARGOS_1252 Genomic island TA190816 3464756..3475784 0.007 View NZ_CP069935 Escherichia coli strain FDAARGOS_1302 Genomic island TA192161 4522868..4534659 0.005 View NZ_CP070007 Escherichia coli strain FDAARGOS_1288 Genomic island TA192623 1102912..1115139 0.009 View NZ_CP072054 Escherichia coli strain K1508 Genomic island TA197281 4418584..4430124 0 View NZ_CP076344 Escherichia coli strain AVS0096 Genomic island TA205514 574038..585828 0.005 View NZ_CP077969 Escherichia coli strain JM83 Genomic island TA208777 4448254..4460044 0.004 View NZ_CP079991 Escherichia coli strain KMS2005 Genomic island TA210452 783600..795390 0.004 View NZ_CP079993 Escherichia coli strain EV36 Genomic island TA210516 783600..795390 0.004 View NZ_CP080155 Escherichia coli strain PK8261 Genomic island TA211118 4322320..4333348 0.007 View NZ_CP080163 Escherichia coli strain PK8275 Genomic island TA211162 4930904..4941932 0.007 View NZ_CP083410 Escherichia coli strain RP437 Genomic island TA216393 4533103..4544893 0.004 View NZ_CP086334 Escherichia coli strain EBJ003 Genomic island TA222995 2657763..2668790 0.007 View NZ_CP087136 Escherichia coli strain JW5503 Genomic island TA224853 4522226..4534016 0.004 View NZ_CP087287 Escherichia coli strain APEC 16-1068 Genomic island TA225215 584569..596362 0.005 View NZ_CP087564 Escherichia coli strain CM2010-0578/1 Genomic island TA225494 3894246..3906038 0.01 View NZ_CP090196 Escherichia coli strain YL3 Genomic island TA230206 4405082..4416109 0.007 View NZ_CP091065 Escherichia coli strain DOC14 Genomic island TA232637 4522226..4534016 0.004 View NZ_CP091682 Escherichia coli strain KKo003 Genomic island TA234490 573406..585196 0.005 View NZ_CP092702 Escherichia coli strain S-P-C-029.01 Genomic island TA237002 4533186..4544976 0.004 View NZ_CP093368 Escherichia coli strain EV36 mutant 1a Genomic island TA238240 783600..795390 0.004 View NZ_CP095518 Escherichia coli strain GN02350 Genomic island TA242177 1336759..1347788 0.006 View NZ_CP102378 Escherichia coli strain JB41 Genomic island TA253523 4543875..4555665 0.004 View NZ_CP102379 Escherichia coli strain BM28 lysU Genomic island TA253557 4409021..4422150 0.007 View NZ_CP102380 Escherichia coli strain BM28 Genomic island TA253591 4410629..4423758 0.007 View NZ_CP102488 Escherichia coli O15:H18 strain ST69 Genomic island TA253748 2904224..2915252 0.007 View NZ_CP103633 Escherichia coli strain 2900 Genomic island TA255942 4407363..4418390 0.007 View NZ_CP103718 Escherichia coli strain 1579 Genomic island TA256341 4348161..4359188 0.007 View NZ_CP110996 Escherichia coli strain XYEH3783 Genomic island TA264699 3468430..3480220 0.005 View NZ_CP116103 Escherichia coli strain DETEC-P836 Genomic island TA267959 574507..586297 0.005 View NZ_CP116115 Escherichia coli strain DETEC-P793 Genomic island TA268054 575407..587197 0.005 View NZ_CP116191 Escherichia coli strain DETEC-E1070 Genomic island TA268361 574487..586277 0.005 View NZ_CP116194 Escherichia coli strain DETEC-E1005 Genomic island TA268388 574497..586287 0.005 View NZ_CP122316 Escherichia coli strain HT-946 Genomic island TA276675 2863259..2875049 0.004 View NZ_CP122318 Escherichia coli strain HT873X1 Genomic island TA276737 2895058..2906848 0.004 View NZ_CP122319 Escherichia coli strain BW25113 Genomic island TA276757 2332634..2344424 0.004 View NZ_CP126928 Escherichia coli O2:K1:H4 strain APEC E12053 Genomic island TA283066 4139608..4150637 0.007 View NZ_LM993812 Escherichia coli strain K-12 substr. HMS174 Genomic island TA285415 4476447..4488237 0.004 View NZ_LN832404 Escherichia coli K-12 substr. AG100 Genomic island TA285673 4529713..4541503 0.004 View NZ_LR134227 Escherichia coli strain NCTC9102 Genomic island TA287182 3918538..3929566 0.007 View NZ_LR740758 Escherichia coli strain BEN5202 isolate laying hen 51 weeks old Genomic island TA288974 5013926..5025717 0.005 View NZ_LR881938 Escherichia coli str. K-12 substr. MG1655 strain K-12 Genomic island TA289531 4516733..4528523 0.004 View NZ_LR890410 Escherichia coli isolate MSB2_1A-sc-2280429 Genomic island TA290924 3443589..3455379 0.005 View NZ_LT615377 Escherichia coli isolate 106 Genomic island TA293359 4529713..4541503 0.004 View NZ_LT615378 Escherichia coli isolate 103 Genomic island TA293390 4529713..4541503 0.004 View NC_000913 Escherichia coli str. K-12 substr. MG1655 Genomic island TA006279 4533239..4545029 0.004 View NC_007779 Escherichia coli str. K-12 substr. W3110 Genomic island TA021460 4537919..4549709 0.004 View NC_012759 Escherichia coli BW2952 Genomic island TA023876 4469997..4481537 0 View NC_017638 Escherichia coli DH1 Genomic island TA027426 4513009..4524807 0.004 View NZ_CP009273 Escherichia coli BW25113 Genomic island TA048705 4523056..4534846 0.004 View NZ_CP017979 Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 Genomic island TA068445 4432698..4444488 0.004 View NZ_HG738867 Escherichia coli str. K-12 substr. MC4100 strain K-12 Genomic island TA285034 4419085..4430625 0	inside	Genomic island	-	fimE / fimA / fimI / fimC	4419085..4430625	11540

Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.

Domains

Predicted by InterproScan

Toxin

• Putative toxin of bacterial toxin-antitoxin pair (1-85)

Antitoxin

• GNAT domain (18-121)

Sequences

Toxin

Protein

• Length: 86 a.a.
• Molecular weight: 9734.29 Da
• Isoelectric Point: 11.0090

>T20089 CDJ74525.1 HG738867:c4419899-4419642 [Escherichia coli str. K-12 substr. MC4100]
MNLSRQEQHTLHVLAKGRRIAHVRDSSGRVTSVECYSREGLLLTDCTLAVFKKLKTKKLIKSVNGQPYRINTTELNKVRA
QLDNR

Nucleotide

• Length: 258 bp

>T20089 HG738867:c4419899-4419642 [Escherichia coli str. K-12 substr. MC4100]
ATGAATTTATCCCGTCAGGAACAACATACCTTACACGTTCTCGCTAAAGGTAGACGTATTGCGCACGTCCGCGATTCTTC
AGGCCGCGTCACTTCCGTTGAATGCTACAGCCGCGAAGGGCTGTTGCTGACCGACTGCACGCTCGCCGTCTTCAAAAAAC
TCAAAACCAAAAAACTTATCAAGTCCGTCAATGGCCAGCCCTATCGAATCAACACCACCGAGCTGAATAAAGTTCGCGCT
CAGCTCGATAATCGCTAA

Antitoxin

Protein

• Length: 182 a.a.
• Molecular weight: 19956.90 Da
• Isoelectric Point: 6.3277

>AT20089 CDJ74524.1 HG738867:c4419630-4419085 [Escherichia coli str. K-12 substr. MC4100]
MTVHHFTFHITDKSDASDIREVETRAFGFSKEADLVASLLEDESARPALSLLARYEGKAVGHILFTRATFKGEMDSPLMH
ILAPLAVIPEYQGMGVGGRLIRTGIEHLRLMGCQTVFVLGHATYYPRHGFEPCAGDKGYPAPYPIPEEHKACWMMQSLTA
QPMTLTGHIRCADPDETGALT

Nucleotide

• Length: 546 bp

>AT20089 HG738867:c4419630-4419085 [Escherichia coli str. K-12 substr. MC4100]
ATGACAGTACACCACTTCACTTTTCATATCACAGATAAAAGTGATGCCAGTGATATCCGGGAAGTCGAAACCCGCGCATT
TGGCTTCAGCAAAGAAGCCGATTTAGTGGCCTCTTTACTTGAGGATGAAAGCGCGCGCCCCGCGTTATCGCTGCTAGCCC
GGTATGAAGGCAAAGCCGTCGGGCATATTTTATTTACCCGGGCAACCTTCAAAGGAGAAATGGATTCACCGTTGATGCAC
ATCCTCGCTCCCCTGGCGGTCATACCGGAATACCAAGGGATGGGCGTGGGAGGACGGTTGATACGCACTGGCATCGAGCA
CCTGAGGTTGATGGGCTGCCAGACGGTTTTTGTTCTCGGCCACGCCACCTATTACCCCCGACATGGGTTCGAACCCTGTG
CCGGAGACAAAGGCTATCCGGCACCTTATCCCATCCCGGAGGAGCACAAAGCCTGCTGGATGATGCAATCACTCACCGCT
CAGCCCATGACCCTGACCGGCCACATCCGGTGCGCAGACCCTGATGAAACCGGAGCACTGACGTGA