NZ_LT6153774529713..4541503

MGE detailed information

MGE type: Genomic_island        MGE length: 11791 bp
Accession: NZ_LT615377        Location: 4529713..4541503         Organism: Escherichia coli isolate 106       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
BV315_RS23920 () 4525404..4526717 - 1314 WP_000460843.1 galactitol-specific PTS transporter subunit IIC -
BV315_RS23925 () 4526729..4527007 - 279 WP_000722973.1 PTS sugar transporter subunit IIB -
BV315_RS23930 () 4527004..4528125 - 1122 WP_000010829.1 M42 family metallopeptidase -
BV315_RS25505 () 4528370..4528486 - 117 Protein_4265 VOC family protein -
BV315_RS24870 () 4528524..4528742 - 219 Protein_4266 hypothetical protein -
BV315_RS23940 () 4528911..4529657 - 747 WP_000354251.1 class I SAM-dependent methyltransferase -
BV315_RS23945 () 4529713..4530258 - 546 WP_001309181.1 N-acetyltransferase Antitoxin Detail
BV315_RS23950 () 4530270..4530527 - 258 WP_001054376.1 hypothetical protein Toxin Detail
BV315_RS25345 () 4530904..4531149 - 246 Protein_4270 GNAT family N-acetyltransferase -
BV315_RS23960 () 4531265..4532505 + 1241 Protein_4271 helicase YjhR -
BV315_RS23970 () 4533088..4534068 - 981 WP_000991438.1 9-O-acetyl-N-acetylneuraminic acid deacetylase -
BV315_RS23975 () 4534133..4535239 - 1107 WP_001309184.1 N-acetylneuraminate epimerase -
BV315_RS23980 () 4535259..4535975 - 717 WP_001295734.1 N-acetylneuraminic acid outer membrane channel NanC -
BV315_RS23990 () 4537431..4538033 + 603 WP_000790583.1 ISKra4 family transposase ISCep1 VF
BV315_RS23995 () 4538511..4539107 + 597 WP_000044711.1 ISKra4 family transposase ISCep1 VF
BV315_RS24010 () 4539589..4540137 + 549 WP_000695564.1 Type-1 fimbrial protein, A chain VF
BV315_RS24015 () 4540202..4540741 + 540 WP_000824114.1 putative major fimbrial subunit LpfA VF
BV315_RS24020 () 4540778..4541503 + 726 WP_000066547.1 Chaperone protein FimC VF
BV315_RS24025 () 4541570..4544206 + 2637 WP_000121005.1 fimbrial usher FimD -
BV315_RS24030 () 4544216..4544746 + 531 WP_001244827.1 type 1 fimbria minor subunit FimF -
BV315_RS24035 () 4544759..4545262 + 504 WP_000870592.1 type 1 fimbria minor subunit FimG -
BV315_RS24040 () 4545282..4546184 + 903 WP_000832247.1 type 1 fimbria D-mannose specific adhesin FimH -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Escherichia coli str. K-12 substr. MC4100 Genomic island TA20089 HG738867 4419085..4430625 0.004
Escherichia coli str. K-12 substr. MG1655 Genomic island TA6279 NC_000913 4533239..4545029 0
Escherichia coli str. K-12 substr. W3110 Genomic island TA21460 NC_007779 4537919..4549709 0
Escherichia coli BW2952 Genomic island TA23876 NC_012759 4469997..4481537 0.004
Escherichia coli DH1 Genomic island TA27426 NC_017638 4513009..4524807 0
Escherichia coli BW25113 Genomic island TA48705 NZ_CP009273 4523056..4534846 0
Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 Genomic island TA68445 NZ_CP017979 4432698..4444488 0
Escherichia coli str. K-12 substr. MC4100 strain K-12 Genomic island TA285034 NZ_HG738867 4419085..4430625 0.004