MGE detailed information
MGE type: Genomic_island MGE length: 11791 bp
Accession: NZ_CP040643 Location: 4666710..4678500 Organism: Escherichia coli strain BE104 Replicon: chromosome
Accession: NZ_CP040643 Location: 4666710..4678500 Organism: Escherichia coli strain BE104 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FGC38_RS22800 () | 4662401..4663714 | - | 1314 | WP_000460843.1 | galactitol-specific PTS transporter subunit IIC | - |
| FGC38_RS22805 () | 4663726..4664004 | - | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| FGC38_RS22810 () | 4664001..4665122 | - | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| FGC38_RS23620 () | 4665367..4665483 | - | 117 | Protein_4419 | VOC family protein | - |
| FGC38_RS22815 () | 4665521..4665739 | - | 219 | Protein_4420 | hypothetical protein | - |
| FGC38_RS22820 () | 4665908..4666654 | - | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| FGC38_RS22825 () | 4666710..4667255 | - | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| FGC38_RS22830 () | 4667267..4667524 | - | 258 | WP_001054376.1 | hypothetical protein | Toxin Detail |
| FGC38_RS22835 () | 4667901..4668146 | - | 246 | Protein_4424 | GNAT family N-acetyltransferase | - |
| FGC38_RS22840 () | 4668262..4669502 | + | 1241 | Protein_4425 | helicase YjhR | - |
| FGC38_RS22845 () | 4670085..4671065 | - | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| FGC38_RS22850 () | 4671130..4672236 | - | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| FGC38_RS22855 () | 4672256..4672972 | - | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| FGC38_RS22860 () | 4674428..4675030 | + | 603 | WP_000790583.1 | type 1 fimbria switch DNA invertase FimB | - |
| FGC38_RS22865 () | 4675508..4676104 | + | 597 | WP_000044711.1 | type 1 fimbria switch DNA invertase FimE | - |
| FGC38_RS22870 () | 4676586..4677134 | + | 549 | WP_000695564.1 | type 1 fimbrial major subunit FimA | - |
| FGC38_RS22875 () | 4677199..4677738 | + | 540 | WP_000824114.1 | type 1 fimbrial protein | - |
| FGC38_RS22880 () | 4677775..4678500 | + | 726 | WP_000066547.1 | type 1 fimbria chaperone FimC | - |
| FGC38_RS22885 () | 4678567..4681203 | + | 2637 | WP_000121005.1 | fimbrial usher FimD | - |
| FGC38_RS22890 () | 4681213..4681743 | + | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| FGC38_RS22895 () | 4681756..4682259 | + | 504 | WP_000870592.1 | type 1 fimbria minor subunit FimG | - |
| FGC38_RS22900 () | 4682279..4683181 | + | 903 | WP_000832247.1 | type 1 fimbria D-mannose specific adhesin FimH | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20089 | HG738867 | 4419085..4430625 | 0.004 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA6279 | NC_000913 | 4533239..4545029 | 0 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21460 | NC_007779 | 4537919..4549709 | 0 | |
| Escherichia coli BW2952 | Genomic island | TA23876 | NC_012759 | 4469997..4481537 | 0.004 | |
| Escherichia coli DH1 | Genomic island | TA27426 | NC_017638 | 4513009..4524807 | 0 | |
| Escherichia coli BW25113 | Genomic island | TA48705 | NZ_CP009273 | 4523056..4534846 | 0 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68445 | NZ_CP017979 | 4432698..4444488 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285034 | NZ_HG738867 | 4419085..4430625 | 0.004 |