MGE detailed information
MGE type: Genomic_island MGE length: 11029 bp
Accession: NZ_CP102488 Location: 2904224..2915252 Organism: Escherichia coli O15:H18 strain ST69 Replicon: chromosome
Accession: NZ_CP102488 Location: 2904224..2915252 Organism: Escherichia coli O15:H18 strain ST69 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NUI00_RS14095 (2899703) | 2899703..2900206 | - | 504 | WP_000870592.1 | type 1 fimbria minor subunit FimG | - |
| NUI00_RS14100 (2900219) | 2900219..2900749 | - | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| NUI00_RS14105 (2900759) | 2900759..2903395 | - | 2637 | WP_000121002.1 | fimbrial usher FimD | - |
| NUI00_RS14110 (2903462) | 2903462..2904187 | - | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
| NUI00_RS14115 (2904224) | 2904224..2904763 | - | 540 | WP_000824114.1 | putative major fimbrial subunit LpfA | VF |
| NUI00_RS14120 (2904828) | 2904828..2905376 | - | 549 | WP_000695557.1 | Type-1 fimbrial protein, A chain | VF |
| NUI00_RS14125 (2905858) | 2905858..2906454 | - | 597 | WP_000044711.1 | ISKra4 family transposase ISCep1 | VF |
| NUI00_RS14130 (2906932) | 2906932..2907534 | - | 603 | WP_000790583.1 | ISKra4 family transposase ISCep1 | VF |
| NUI00_RS14135 (2908990) | 2908990..2909706 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| NUI00_RS14140 (2909726) | 2909726..2910832 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| NUI00_RS14145 (2910897) | 2910897..2911877 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| NUI00_RS14150 (2911987) | 2911987..2912192 | + | 206 | Protein_2770 | HNH endonuclease | - |
| NUI00_RS14155 (2912460) | 2912460..2913700 | - | 1241 | Protein_2771 | helicase YjhR | - |
| NUI00_RS14160 (2913816) | 2913816..2913947 | + | 132 | WP_001309182.1 | hypothetical protein | - |
| NUI00_RS14165 (2914438) | 2914438..2914695 | + | 258 | WP_001054376.1 | YjhX family toxin | Toxin Detail |
| NUI00_RS14170 (2914707) | 2914707..2915252 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| NUI00_RS14175 (2915308) | 2915308..2916054 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| NUI00_RS14180 (2916223) | 2916223..2916441 | + | 219 | Protein_2776 | hypothetical protein | - |
| NUI00_RS14185 (2916479) | 2916479..2916595 | + | 117 | Protein_2777 | VOC family protein | - |
| NUI00_RS14190 (2916840) | 2916840..2917961 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| NUI00_RS14195 (2917958) | 2917958..2918236 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB SgcB | - |
| NUI00_RS14200 (2918248) | 2918248..2919561 | + | 1314 | WP_000460843.1 | PTS sugar transporter subunit IIC SgcC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20089 | HG738867 | 4419085..4430625 | 0.007 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA6279 | NC_000913 | 4533239..4545029 | 0.002 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21460 | NC_007779 | 4537919..4549709 | 0.002 | |
| Escherichia coli BW2952 | Genomic island | TA23876 | NC_012759 | 4469997..4481537 | 0.007 | |
| Escherichia coli DH1 | Genomic island | TA27426 | NC_017638 | 4513009..4524807 | 0.003 | |
| Escherichia coli BW25113 | Genomic island | TA48705 | NZ_CP009273 | 4523056..4534846 | 0.002 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68445 | NZ_CP017979 | 4432698..4444488 | 0.002 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285034 | NZ_HG738867 | 4419085..4430625 | 0.007 |