MGE detailed information
MGE type: Genomic_island MGE length: 11791 bp
Accession: NZ_CP079993 Location: 783600..795390 Organism: Escherichia coli strain EV36 Replicon: chromosome
Accession: NZ_CP079993 Location: 783600..795390 Organism: Escherichia coli strain EV36 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KYK84_RS03755 (779291) | 779291..780604 | - | 1314 | WP_000460843.1 | PTS sugar transporter subunit IIC SgcC | - |
| KYK84_RS03760 (780616) | 780616..780894 | - | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB SgcB | - |
| KYK84_RS03765 (780891) | 780891..782012 | - | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| KYK84_RS03770 (782257) | 782257..782373 | - | 117 | Protein_743 | VOC family protein | - |
| KYK84_RS03775 (782411) | 782411..782629 | - | 219 | Protein_744 | hypothetical protein | - |
| KYK84_RS03780 (782798) | 782798..783544 | - | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| KYK84_RS03785 (783600) | 783600..784145 | - | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| KYK84_RS03790 (784157) | 784157..784414 | - | 258 | WP_001054376.1 | YjhX family toxin | Toxin Detail |
| KYK84_RS03795 (784905) | 784905..785036 | - | 132 | WP_001309182.1 | hypothetical protein | - |
| KYK84_RS03800 (785152) | 785152..786392 | + | 1241 | Protein_749 | helicase YjhR | - |
| KYK84_RS03805 (786660) | 786660..786865 | - | 206 | Protein_750 | HNH endonuclease | - |
| KYK84_RS03810 (786975) | 786975..787955 | - | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| KYK84_RS03815 (788020) | 788020..789126 | - | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| KYK84_RS03820 (789146) | 789146..789862 | - | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| KYK84_RS03825 (791318) | 791318..791920 | + | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| KYK84_RS03830 (792398) | 792398..792994 | + | 597 | WP_000044711.1 | Tyrosine recombinase XerD | VF |
| KYK84_RS03835 (793476) | 793476..794024 | + | 549 | WP_000695564.1 | Type-1 fimbrial protein, A chain | VF |
| KYK84_RS03840 (794089) | 794089..794628 | + | 540 | WP_000824114.1 | putative major fimbrial subunit LpfA | VF |
| KYK84_RS03845 (794665) | 794665..795390 | + | 726 | WP_000066547.1 | Chaperone protein FimC | VF |
| KYK84_RS03850 (795457) | 795457..798093 | + | 2637 | WP_240275569.1 | fimbrial usher FimD | - |
| KYK84_RS03855 (798103) | 798103..798633 | + | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| KYK84_RS03860 (798646) | 798646..799149 | + | 504 | WP_000870592.1 | type 1 fimbria minor subunit FimG | - |
| KYK84_RS03865 (799169) | 799169..800071 | + | 903 | WP_000832247.1 | type 1 fimbria D-mannose specific adhesin FimH | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20089 | HG738867 | 4419085..4430625 | 0.004 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA6279 | NC_000913 | 4533239..4545029 | 0 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21460 | NC_007779 | 4537919..4549709 | 0 | |
| Escherichia coli BW2952 | Genomic island | TA23876 | NC_012759 | 4469997..4481537 | 0.004 | |
| Escherichia coli DH1 | Genomic island | TA27426 | NC_017638 | 4513009..4524807 | 0 | |
| Escherichia coli BW25113 | Genomic island | TA48705 | NZ_CP009273 | 4523056..4534846 | 0 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68445 | NZ_CP017979 | 4432698..4444488 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285034 | NZ_HG738867 | 4419085..4430625 | 0.004 |