MGE detailed information
MGE type: Genomic_island MGE length: 11791 bp
Accession: NZ_CP049852 Location: 575343..587133 Organism: Escherichia coli strain UPEC-774U/190308 Replicon: chromosome
Accession: NZ_CP049852 Location: 575343..587133 Organism: Escherichia coli strain UPEC-774U/190308 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G9W34_RS02730 (571034) | 571034..572347 | - | 1314 | WP_000460843.1 | PTS sugar transporter subunit IIC SgcC | - |
| G9W34_RS02735 (572359) | 572359..572637 | - | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB SgcB | - |
| G9W34_RS02740 (572634) | 572634..573755 | - | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| G9W34_RS02745 (574000) | 574000..574116 | - | 117 | Protein_533 | VOC family protein | - |
| G9W34_RS02750 (574154) | 574154..574372 | - | 219 | Protein_534 | hypothetical protein | - |
| G9W34_RS02755 (574541) | 574541..575287 | - | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| G9W34_RS02760 (575343) | 575343..575888 | - | 546 | WP_001540600.1 | N-acetyltransferase | Antitoxin Detail |
| G9W34_RS02765 (575900) | 575900..576157 | - | 258 | WP_001054376.1 | YjhX family toxin | Toxin Detail |
| G9W34_RS24870 (576648) | 576648..576779 | - | 132 | WP_001309182.1 | hypothetical protein | - |
| G9W34_RS02775 (576895) | 576895..578135 | + | 1241 | Protein_539 | helicase YjhR | - |
| G9W34_RS24875 (578403) | 578403..578608 | - | 206 | Protein_540 | HNH endonuclease | - |
| G9W34_RS02780 (578718) | 578718..579698 | - | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| G9W34_RS02785 (579763) | 579763..580869 | - | 1107 | WP_219934327.1 | N-acetylneuraminate epimerase | - |
| G9W34_RS02790 (580889) | 580889..581605 | - | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| G9W34_RS02795 (583061) | 583061..583663 | + | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| G9W34_RS02800 (584141) | 584141..584737 | + | 597 | WP_000044711.1 | Tyrosine recombinase XerD | VF |
| G9W34_RS02805 (585219) | 585219..585767 | + | 549 | WP_001774144.1 | Type-1 fimbrial protein, A chain | VF |
| G9W34_RS02810 (585832) | 585832..586371 | + | 540 | WP_000824114.1 | putative major fimbrial subunit LpfA | VF |
| G9W34_RS02815 (586408) | 586408..587133 | + | 726 | WP_000066560.1 | Chaperone protein FimC | VF |
| G9W34_RS02820 (587200) | 587200..589836 | + | 2637 | WP_000121002.1 | fimbrial usher FimD | - |
| G9W34_RS02825 (589846) | 589846..590376 | + | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| G9W34_RS02830 (590389) | 590389..590892 | + | 504 | WP_000870592.1 | type 1 fimbria minor subunit FimG | - |
| G9W34_RS02835 (590912) | 590912..591814 | + | 903 | WP_001774145.1 | type 1 fimbria D-mannose specific adhesin FimH | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20089 | HG738867 | 4419085..4430625 | 0.005 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA6279 | NC_000913 | 4533239..4545029 | 0.001 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21460 | NC_007779 | 4537919..4549709 | 0.001 | |
| Escherichia coli BW2952 | Genomic island | TA23876 | NC_012759 | 4469997..4481537 | 0.005 | |
| Escherichia coli DH1 | Genomic island | TA27426 | NC_017638 | 4513009..4524807 | 0.001 | |
| Escherichia coli BW25113 | Genomic island | TA48705 | NZ_CP009273 | 4523056..4534846 | 0.001 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68445 | NZ_CP017979 | 4432698..4444488 | 0.001 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285034 | NZ_HG738867 | 4419085..4430625 | 0.005 |