MGE detailed information
MGE type: Genomic_island MGE length: 11791 bp
Accession: NZ_CP092702 Location: 4533186..4544976 Organism: Escherichia coli strain S-P-C-029.01 Replicon: chromosome
Accession: NZ_CP092702 Location: 4533186..4544976 Organism: Escherichia coli strain S-P-C-029.01 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MJ592_RS21980 (4528877) | 4528877..4530190 | - | 1314 | WP_000460843.1 | PTS sugar transporter subunit IIC SgcC | - |
| MJ592_RS21985 (4530202) | 4530202..4530480 | - | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB SgcB | - |
| MJ592_RS21990 (4530477) | 4530477..4531598 | - | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| MJ592_RS21995 (4531843) | 4531843..4531959 | - | 117 | Protein_4302 | VOC family protein | - |
| MJ592_RS22000 (4531997) | 4531997..4532215 | - | 219 | Protein_4303 | hypothetical protein | - |
| MJ592_RS22005 (4532384) | 4532384..4533130 | - | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| MJ592_RS22010 (4533186) | 4533186..4533731 | - | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| MJ592_RS22015 (4533743) | 4533743..4534000 | - | 258 | WP_001054376.1 | YjhX family toxin | Toxin Detail |
| MJ592_RS22020 (4534491) | 4534491..4534622 | - | 132 | WP_001309182.1 | hypothetical protein | - |
| MJ592_RS22025 (4534738) | 4534738..4535978 | + | 1241 | Protein_4308 | helicase YjhR | - |
| MJ592_RS22030 (4536246) | 4536246..4536451 | - | 206 | Protein_4309 | HNH endonuclease | - |
| MJ592_RS22035 (4536561) | 4536561..4537541 | - | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| MJ592_RS22040 (4537606) | 4537606..4538712 | - | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| MJ592_RS22045 (4538732) | 4538732..4539448 | - | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| MJ592_RS22050 (4540904) | 4540904..4541506 | + | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| MJ592_RS22055 (4541984) | 4541984..4542580 | + | 597 | WP_000044711.1 | Tyrosine recombinase XerC | VF |
| MJ592_RS22060 (4543062) | 4543062..4543610 | + | 549 | WP_000695564.1 | hypothetical protein | VF |
| MJ592_RS22065 (4543675) | 4543675..4544214 | + | 540 | WP_000824114.1 | hypothetical protein | VF |
| MJ592_RS22070 (4544251) | 4544251..4544976 | + | 726 | WP_000066547.1 | hypothetical protein | VF |
| MJ592_RS22075 (4545043) | 4545043..4547679 | + | 2637 | WP_000121005.1 | fimbrial usher FimD | - |
| MJ592_RS22080 (4547689) | 4547689..4548219 | + | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| MJ592_RS22085 (4548232) | 4548232..4548735 | + | 504 | WP_000870592.1 | type 1 fimbria minor subunit FimG | - |
| MJ592_RS22090 (4548755) | 4548755..4549657 | + | 903 | WP_000832247.1 | type 1 fimbria D-mannose specific adhesin FimH | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20089 | HG738867 | 4419085..4430625 | 0.004 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA6279 | NC_000913 | 4533239..4545029 | 0 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21460 | NC_007779 | 4537919..4549709 | 0 | |
| Escherichia coli BW2952 | Genomic island | TA23876 | NC_012759 | 4469997..4481537 | 0.004 | |
| Escherichia coli DH1 | Genomic island | TA27426 | NC_017638 | 4513009..4524807 | 0 | |
| Escherichia coli BW25113 | Genomic island | TA48705 | NZ_CP009273 | 4523056..4534846 | 0 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68445 | NZ_CP017979 | 4432698..4444488 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285034 | NZ_HG738867 | 4419085..4430625 | 0.004 |