MGE detailed information
MGE type: Genomic_island MGE length: 11028 bp
Accession: NZ_CP049197 Location: 3587909..3598936 Organism: Escherichia coli strain E597 Replicon: chromosome
Accession: NZ_CP049197 Location: 3587909..3598936 Organism: Escherichia coli strain E597 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G6Z98_RS16965 () | 3583388..3583891 | - | 504 | WP_000870592.1 | type 1 fimbria minor subunit FimG | - |
| G6Z98_RS16970 () | 3583904..3584434 | - | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| G6Z98_RS16975 () | 3584444..3587080 | - | 2637 | WP_000121002.1 | fimbrial usher FimD | - |
| G6Z98_RS16980 () | 3587147..3587872 | - | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
| G6Z98_RS16985 () | 3587909..3588448 | - | 540 | WP_000824114.1 | hypothetical protein | VF |
| G6Z98_RS16990 () | 3588513..3589061 | - | 549 | WP_000695557.1 | hypothetical protein | VF |
| G6Z98_RS16995 () | 3589542..3590138 | - | 597 | WP_000044711.1 | Tyrosine recombinase XerC | VF |
| G6Z98_RS17000 () | 3590616..3591218 | - | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| G6Z98_RS17005 () | 3592674..3593390 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| G6Z98_RS17010 () | 3593410..3594516 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| G6Z98_RS17015 () | 3594581..3595561 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| G6Z98_RS17020 () | 3596144..3597384 | - | 1241 | Protein_3326 | DNA helicase | - |
| G6Z98_RS17025 () | 3597500..3597745 | + | 246 | Protein_3327 | GNAT family N-acetyltransferase | - |
| G6Z98_RS17030 () | 3598122..3598379 | + | 258 | WP_001054376.1 | hypothetical protein | Toxin Detail |
| G6Z98_RS17035 () | 3598391..3598936 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| G6Z98_RS17040 () | 3598992..3599738 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| G6Z98_RS17045 () | 3599907..3600125 | + | 219 | Protein_3331 | hypothetical protein | - |
| G6Z98_RS24540 () | 3600163..3600279 | + | 117 | Protein_3332 | VOC family protein | - |
| G6Z98_RS17050 () | 3600524..3601645 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| G6Z98_RS17055 () | 3601642..3601920 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| G6Z98_RS17060 () | 3601932..3603245 | + | 1314 | WP_000460843.1 | galactitol-specific PTS transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20089 | HG738867 | 4419085..4430625 | 0.007 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA6279 | NC_000913 | 4533239..4545029 | 0.002 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21460 | NC_007779 | 4537919..4549709 | 0.002 | |
| Escherichia coli BW2952 | Genomic island | TA23876 | NC_012759 | 4469997..4481537 | 0.007 | |
| Escherichia coli DH1 | Genomic island | TA27426 | NC_017638 | 4513009..4524807 | 0.003 | |
| Escherichia coli BW25113 | Genomic island | TA48705 | NZ_CP009273 | 4523056..4534846 | 0.002 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68445 | NZ_CP017979 | 4432698..4444488 | 0.002 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285034 | NZ_HG738867 | 4419085..4430625 | 0.007 |