MGE detailed information
MGE type: Genomic_island MGE length: 11790 bp
Accession: NZ_CP022229 Location: 2761077..2772866 Organism: Escherichia coli strain WCHEC96200 Replicon: chromosome
Accession: NZ_CP022229 Location: 2761077..2772866 Organism: Escherichia coli strain WCHEC96200 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DBR04_RS15430 () | 2756768..2758081 | - | 1314 | WP_000460843.1 | galactitol-specific PTS transporter subunit IIC | - |
| DBR04_RS15435 () | 2758093..2758371 | - | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| DBR04_RS15440 () | 2758368..2759489 | - | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| DBR04_RS15445 () | 2759888..2760106 | - | 219 | Protein_2560 | hypothetical protein | - |
| DBR04_RS15450 () | 2760275..2761021 | - | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| DBR04_RS15455 () | 2761077..2761622 | - | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| DBR04_RS15460 () | 2761634..2761891 | - | 258 | WP_001054376.1 | hypothetical protein | Toxin Detail |
| DBR04_RS15465 () | 2762268..2762513 | - | 246 | Protein_2564 | GNAT family N-acetyltransferase | - |
| DBR04_RS15470 () | 2762883..2763869 | + | 987 | WP_001323209.1 | hypothetical protein | - |
| DBR04_RS15475 () | 2764452..2765432 | - | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| DBR04_RS15480 () | 2765497..2766603 | - | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| DBR04_RS15485 () | 2766623..2767339 | - | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| DBR04_RS15490 () | 2768795..2769397 | + | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| DBR04_RS15495 () | 2769875..2770471 | + | 597 | WP_000044711.1 | Tyrosine recombinase XerD | VF |
| DBR04_RS15500 () | 2770952..2771500 | + | 549 | WP_000695557.1 | Type-1 fimbrial protein, A chain | VF |
| DBR04_RS15505 () | 2771565..2772104 | + | 540 | WP_000824114.1 | putative major fimbrial subunit LpfA | VF |
| DBR04_RS15510 () | 2772141..2772866 | + | 726 | WP_000066560.1 | Chaperone protein FimC | VF |
| DBR04_RS15515 () | 2772933..2775569 | + | 2637 | WP_000121002.1 | fimbrial usher FimD | - |
| DBR04_RS15520 () | 2775579..2776109 | + | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| DBR04_RS15525 () | 2776122..2776625 | + | 504 | WP_000870592.1 | type 1 fimbria minor subunit FimG | - |
| DBR04_RS15530 () | 2776645..2777547 | + | 903 | WP_000832247.1 | type 1 fimbria D-mannose specific adhesin FimH | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20089 | HG738867 | 4419085..4430625 | 0.005 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA6279 | NC_000913 | 4533239..4545029 | 0.001 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21460 | NC_007779 | 4537919..4549709 | 0.001 | |
| Escherichia coli BW2952 | Genomic island | TA23876 | NC_012759 | 4469997..4481537 | 0.005 | |
| Escherichia coli DH1 | Genomic island | TA27426 | NC_017638 | 4513009..4524807 | 0.001 | |
| Escherichia coli BW25113 | Genomic island | TA48705 | NZ_CP009273 | 4523056..4534846 | 0.001 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68445 | NZ_CP017979 | 4432698..4444488 | 0.001 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285034 | NZ_HG738867 | 4419085..4430625 | 0.005 |