MGE detailed information
MGE type: Genomic_island MGE length: 11028 bp
Accession: NZ_CP054161 Location: 234138..245165 Organism: Escherichia coli strain STO_Bone2 Replicon: chromosome
Accession: NZ_CP054161 Location: 234138..245165 Organism: Escherichia coli strain STO_Bone2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HRS05_RS01075 (229617) | 229617..230120 | - | 504 | WP_000870592.1 | type 1 fimbria minor subunit FimG | - |
| HRS05_RS01080 (230133) | 230133..230663 | - | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| HRS05_RS01085 (230673) | 230673..233309 | - | 2637 | WP_000121002.1 | fimbrial usher FimD | - |
| HRS05_RS01090 (233376) | 233376..234101 | - | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
| HRS05_RS01095 (234138) | 234138..234677 | - | 540 | WP_000824114.1 | hypothetical protein | VF |
| HRS05_RS01100 (234742) | 234742..235290 | - | 549 | WP_000695557.1 | hypothetical protein | VF |
| HRS05_RS01105 (235771) | 235771..236367 | - | 597 | WP_000044711.1 | hypothetical protein | VF |
| HRS05_RS01110 (236845) | 236845..237447 | - | 603 | WP_000790583.1 | hypothetical protein | VF |
| HRS05_RS01115 (238903) | 238903..239619 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| HRS05_RS01120 (239639) | 239639..240745 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| HRS05_RS01125 (240810) | 240810..241790 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| HRS05_RS01130 (241900) | 241900..242105 | + | 206 | Protein_222 | HNH endonuclease | - |
| HRS05_RS01135 (242373) | 242373..243613 | - | 1241 | Protein_223 | helicase YjhR | - |
| HRS05_RS01140 (243729) | 243729..243860 | + | 132 | WP_001309182.1 | hypothetical protein | - |
| HRS05_RS01145 (244351) | 244351..244608 | + | 258 | WP_001054376.1 | YjhX family toxin | Toxin Detail |
| HRS05_RS01150 (244620) | 244620..245165 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| HRS05_RS01155 (245221) | 245221..245967 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| HRS05_RS01160 (246136) | 246136..246354 | + | 219 | Protein_228 | hypothetical protein | - |
| HRS05_RS01165 (246392) | 246392..246508 | + | 117 | Protein_229 | VOC family protein | - |
| HRS05_RS01170 (246753) | 246753..247874 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| HRS05_RS01175 (247871) | 247871..248149 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB SgcB | - |
| HRS05_RS01180 (248161) | 248161..249474 | + | 1314 | WP_000460843.1 | PTS sugar transporter subunit IIC SgcC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20089 | HG738867 | 4419085..4430625 | 0.007 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA6279 | NC_000913 | 4533239..4545029 | 0.002 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21460 | NC_007779 | 4537919..4549709 | 0.002 | |
| Escherichia coli BW2952 | Genomic island | TA23876 | NC_012759 | 4469997..4481537 | 0.007 | |
| Escherichia coli DH1 | Genomic island | TA27426 | NC_017638 | 4513009..4524807 | 0.003 | |
| Escherichia coli BW25113 | Genomic island | TA48705 | NZ_CP009273 | 4523056..4534846 | 0.002 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68445 | NZ_CP017979 | 4432698..4444488 | 0.002 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285034 | NZ_HG738867 | 4419085..4430625 | 0.007 |