MGE detailed information
MGE type: Genomic_island MGE length: 11030 bp
Accession: NZ_CP095518 Location: 1336759..1347788 Organism: Escherichia coli strain GN02350 Replicon: chromosome
Accession: NZ_CP095518 Location: 1336759..1347788 Organism: Escherichia coli strain GN02350 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MW405_RS06270 (1332238) | 1332238..1332741 | - | 504 | WP_000870592.1 | type 1 fimbria minor subunit FimG | - |
| MW405_RS06275 (1332754) | 1332754..1333284 | - | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| MW405_RS06280 (1333294) | 1333294..1335930 | - | 2637 | WP_000121002.1 | fimbrial usher FimD | - |
| MW405_RS06285 (1335997) | 1335997..1336722 | - | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
| MW405_RS06290 (1336759) | 1336759..1337298 | - | 540 | WP_000824114.1 | putative major fimbrial subunit LpfA | VF |
| MW405_RS06295 (1337363) | 1337363..1337911 | - | 549 | WP_020231080.1 | Type-1 fimbrial protein, A chain | VF |
| MW405_RS06300 (1338394) | 1338394..1338990 | - | 597 | WP_000044711.1 | Tyrosine recombinase XerD | VF |
| MW405_RS06305 (1339468) | 1339468..1340070 | - | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| MW405_RS06310 (1341526) | 1341526..1342242 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| MW405_RS06315 (1342262) | 1342262..1343368 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| MW405_RS06320 (1343433) | 1343433..1344413 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| MW405_RS06325 (1344523) | 1344523..1344728 | + | 206 | Protein_1234 | HNH endonuclease | - |
| MW405_RS06330 (1344996) | 1344996..1346236 | - | 1241 | Protein_1235 | helicase YjhR | - |
| MW405_RS06335 (1346352) | 1346352..1346483 | + | 132 | WP_001309182.1 | hypothetical protein | - |
| MW405_RS06340 (1346974) | 1346974..1347231 | + | 258 | WP_001054376.1 | YjhX family toxin | Toxin Detail |
| MW405_RS06345 (1347243) | 1347243..1347788 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| MW405_RS06350 (1347844) | 1347844..1348590 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| MW405_RS06355 (1348759) | 1348759..1348977 | + | 219 | Protein_1240 | hypothetical protein | - |
| MW405_RS06360 (1349015) | 1349015..1349131 | + | 117 | Protein_1241 | VOC family protein | - |
| MW405_RS06365 (1349376) | 1349376..1350497 | + | 1122 | WP_000010830.1 | M42 family metallopeptidase | - |
| MW405_RS06370 (1350494) | 1350494..1350772 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB SgcB | - |
| MW405_RS06375 (1350784) | 1350784..1352097 | + | 1314 | WP_000460843.1 | PTS sugar transporter subunit IIC SgcC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20089 | HG738867 | 4419085..4430625 | 0.006 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA6279 | NC_000913 | 4533239..4545029 | 0.002 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21460 | NC_007779 | 4537919..4549709 | 0.002 | |
| Escherichia coli BW2952 | Genomic island | TA23876 | NC_012759 | 4469997..4481537 | 0.006 | |
| Escherichia coli DH1 | Genomic island | TA27426 | NC_017638 | 4513009..4524807 | 0.002 | |
| Escherichia coli BW25113 | Genomic island | TA48705 | NZ_CP009273 | 4523056..4534846 | 0.002 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68445 | NZ_CP017979 | 4432698..4444488 | 0.002 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285034 | NZ_HG738867 | 4419085..4430625 | 0.006 |