MGE detailed information
MGE type: Genomic_island MGE length: 11791 bp
Accession: NZ_CP026026 Location: 4436233..4448023 Organism: Escherichia coli strain CAR Replicon: chromosome
Accession: NZ_CP026026 Location: 4436233..4448023 Organism: Escherichia coli strain CAR Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C2H81_RS22945 () | 4431924..4433237 | - | 1314 | WP_000460843.1 | galactitol-specific PTS transporter subunit IIC | - |
| C2H81_RS22950 () | 4433249..4433527 | - | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| C2H81_RS22955 () | 4433524..4434645 | - | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| C2H81_RS23880 () | 4434890..4435006 | - | 117 | Protein_4186 | VOC family protein | - |
| C2H81_RS22960 () | 4435044..4435262 | - | 219 | Protein_4187 | hypothetical protein | - |
| C2H81_RS22965 () | 4435431..4436177 | - | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| C2H81_RS22970 () | 4436233..4436778 | - | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| C2H81_RS22975 () | 4436790..4437047 | - | 258 | WP_001054376.1 | hypothetical protein | Toxin Detail |
| C2H81_RS22985 () | 4437424..4437669 | - | 246 | Protein_4191 | GNAT family N-acetyltransferase | - |
| C2H81_RS22995 () | 4437785..4439025 | + | 1241 | Protein_4192 | helicase YjhR | - |
| C2H81_RS23000 () | 4439608..4440588 | - | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| C2H81_RS23005 () | 4440653..4441759 | - | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| C2H81_RS23010 () | 4441779..4442495 | - | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| C2H81_RS23025 () | 4443951..4444553 | + | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| C2H81_RS23030 () | 4445031..4445627 | + | 597 | WP_000044711.1 | Tyrosine recombinase XerD | VF |
| C2H81_RS23040 () | 4446109..4446657 | + | 549 | WP_000695564.1 | Type-1 fimbrial protein, A chain | VF |
| C2H81_RS23045 () | 4446722..4447261 | + | 540 | WP_000824114.1 | putative major fimbrial subunit LpfA | VF |
| C2H81_RS23050 () | 4447298..4448023 | + | 726 | WP_000066547.1 | Chaperone protein FimC | VF |
| C2H81_RS23055 () | 4448090..4450726 | + | 2637 | WP_000121005.1 | fimbrial usher FimD | - |
| C2H81_RS23060 () | 4450736..4451266 | + | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| C2H81_RS23065 () | 4451279..4451782 | + | 504 | WP_000870592.1 | type 1 fimbria minor subunit FimG | - |
| C2H81_RS23070 () | 4451802..4452704 | + | 903 | WP_000832247.1 | type 1 fimbria D-mannose specific adhesin FimH | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20089 | HG738867 | 4419085..4430625 | 0.004 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA6279 | NC_000913 | 4533239..4545029 | 0 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21460 | NC_007779 | 4537919..4549709 | 0 | |
| Escherichia coli BW2952 | Genomic island | TA23876 | NC_012759 | 4469997..4481537 | 0.004 | |
| Escherichia coli DH1 | Genomic island | TA27426 | NC_017638 | 4513009..4524807 | 0 | |
| Escherichia coli BW25113 | Genomic island | TA48705 | NZ_CP009273 | 4523056..4534846 | 0 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68445 | NZ_CP017979 | 4432698..4444488 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285034 | NZ_HG738867 | 4419085..4430625 | 0.004 |