MGE detailed information
MGE type: Genomic_island MGE length: 11791 bp
Accession: NZ_CP049839 Location: 574399..586189 Organism: Escherichia coli strain UPEC-455U/190220 Replicon: chromosome
Accession: NZ_CP049839 Location: 574399..586189 Organism: Escherichia coli strain UPEC-455U/190220 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G9W36_RS02725 (570090) | 570090..571403 | - | 1314 | WP_000460843.1 | PTS sugar transporter subunit IIC SgcC | - |
| G9W36_RS02730 (571415) | 571415..571693 | - | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB SgcB | - |
| G9W36_RS02735 (571690) | 571690..572811 | - | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| G9W36_RS02740 (573056) | 573056..573172 | - | 117 | Protein_532 | VOC family protein | - |
| G9W36_RS02745 (573210) | 573210..573428 | - | 219 | Protein_533 | hypothetical protein | - |
| G9W36_RS02750 (573597) | 573597..574343 | - | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| G9W36_RS02755 (574399) | 574399..574944 | - | 546 | WP_001540600.1 | N-acetyltransferase | Antitoxin Detail |
| G9W36_RS02760 (574956) | 574956..575213 | - | 258 | WP_001054376.1 | YjhX family toxin | Toxin Detail |
| G9W36_RS25335 (575704) | 575704..575835 | - | 132 | WP_001309182.1 | hypothetical protein | - |
| G9W36_RS02770 (575951) | 575951..577191 | + | 1241 | Protein_538 | helicase YjhR | - |
| G9W36_RS25340 (577459) | 577459..577664 | - | 206 | Protein_539 | HNH endonuclease | - |
| G9W36_RS02775 (577774) | 577774..578754 | - | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| G9W36_RS02780 (578819) | 578819..579925 | - | 1107 | WP_001774143.1 | N-acetylneuraminate epimerase | - |
| G9W36_RS02785 (579945) | 579945..580661 | - | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| G9W36_RS02790 (582117) | 582117..582719 | + | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| G9W36_RS02795 (583197) | 583197..583793 | + | 597 | WP_000044711.1 | Tyrosine recombinase XerC | VF |
| G9W36_RS02800 (584275) | 584275..584823 | + | 549 | WP_001774144.1 | hypothetical protein | VF |
| G9W36_RS02805 (584888) | 584888..585427 | + | 540 | WP_000824114.1 | hypothetical protein | VF |
| G9W36_RS02810 (585464) | 585464..586189 | + | 726 | WP_000066560.1 | hypothetical protein | VF |
| G9W36_RS02815 (586256) | 586256..588892 | + | 2637 | WP_000121002.1 | fimbrial usher FimD | - |
| G9W36_RS02820 (588902) | 588902..589432 | + | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| G9W36_RS02825 (589445) | 589445..589948 | + | 504 | WP_000870592.1 | type 1 fimbria minor subunit FimG | - |
| G9W36_RS02830 (589968) | 589968..590870 | + | 903 | WP_001774145.1 | type 1 fimbria D-mannose specific adhesin FimH | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20089 | HG738867 | 4419085..4430625 | 0.005 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA6279 | NC_000913 | 4533239..4545029 | 0.001 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21460 | NC_007779 | 4537919..4549709 | 0.001 | |
| Escherichia coli BW2952 | Genomic island | TA23876 | NC_012759 | 4469997..4481537 | 0.005 | |
| Escherichia coli DH1 | Genomic island | TA27426 | NC_017638 | 4513009..4524807 | 0.001 | |
| Escherichia coli BW25113 | Genomic island | TA48705 | NZ_CP009273 | 4523056..4534846 | 0.001 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68445 | NZ_CP017979 | 4432698..4444488 | 0.001 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285034 | NZ_HG738867 | 4419085..4430625 | 0.005 |