MGE detailed information
MGE type: Genomic_island MGE length: 11029 bp
Accession: NZ_LR134227 Location: 3918538..3929566 Organism: Escherichia coli strain NCTC9102 Replicon: chromosome
Accession: NZ_LR134227 Location: 3918538..3929566 Organism: Escherichia coli strain NCTC9102 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL093_RS19035 () | 3914017..3914520 | - | 504 | WP_000870592.1 | type 1 fimbria minor subunit FimG | - |
| EL093_RS19040 () | 3914533..3915063 | - | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| EL093_RS19045 () | 3915073..3917709 | - | 2637 | WP_000121002.1 | fimbrial usher FimD | - |
| EL093_RS19050 () | 3917776..3918501 | - | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
| EL093_RS19055 () | 3918538..3919077 | - | 540 | WP_000824114.1 | hypothetical protein | VF |
| EL093_RS19060 () | 3919142..3919690 | - | 549 | WP_000695564.1 | hypothetical protein | VF |
| EL093_RS19065 () | 3920172..3920768 | - | 597 | WP_000044711.1 | hypothetical protein | VF |
| EL093_RS19070 () | 3921246..3921848 | - | 603 | WP_000790583.1 | hypothetical protein | VF |
| EL093_RS19075 () | 3923304..3924020 | + | 717 | WP_126323159.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| EL093_RS19080 () | 3924040..3925146 | + | 1107 | WP_023568191.1 | N-acetylneuraminate epimerase | - |
| EL093_RS19085 () | 3925211..3926191 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| EL093_RS19090 () | 3926774..3928014 | - | 1241 | Protein_3708 | helicase YjhR | - |
| EL093_RS19095 () | 3928130..3928375 | + | 246 | Protein_3709 | GNAT family N-acetyltransferase | - |
| EL093_RS19100 () | 3928752..3929009 | + | 258 | WP_126323161.1 | YjhX family toxin | Toxin Detail |
| EL093_RS19105 () | 3929021..3929566 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| EL093_RS19110 () | 3929622..3930368 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| EL093_RS19115 () | 3930405..3931247 | + | 843 | Protein_3713 | xylonate dehydratase YjhG | - |
| EL093_RS19120 () | 3931354..3932703 | + | 1350 | WP_001128363.1 | GntP family permease | - |
| EL093_RS19125 () | 3933050..3934036 | + | 987 | WP_000373366.1 | sugar-binding transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20089 | HG738867 | 4419085..4430625 | 0.007 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA6279 | NC_000913 | 4533239..4545029 | 0.002 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21460 | NC_007779 | 4537919..4549709 | 0.002 | |
| Escherichia coli BW2952 | Genomic island | TA23876 | NC_012759 | 4469997..4481537 | 0.007 | |
| Escherichia coli DH1 | Genomic island | TA27426 | NC_017638 | 4513009..4524807 | 0.002 | |
| Escherichia coli BW25113 | Genomic island | TA48705 | NZ_CP009273 | 4523056..4534846 | 0.002 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68445 | NZ_CP017979 | 4432698..4444488 | 0.002 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285034 | NZ_HG738867 | 4419085..4430625 | 0.007 |