MGE detailed information
MGE type: Genomic_island MGE length: 11028 bp
Accession: NZ_CP064103 Location: 4502327..4513354 Organism: Escherichia coli strain IR53017 Replicon: chromosome
Accession: NZ_CP064103 Location: 4502327..4513354 Organism: Escherichia coli strain IR53017 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ISU84_RS21725 () | 4497807..4498310 | - | 504 | WP_000870592.1 | type 1 fimbria minor subunit FimG | - |
| ISU84_RS21730 () | 4498323..4498853 | - | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| ISU84_RS21735 () | 4498863..4501499 | - | 2637 | WP_000121002.1 | fimbrial usher FimD | - |
| ISU84_RS21740 () | 4501565..4502290 | - | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
| ISU84_RS21745 () | 4502327..4502866 | - | 540 | WP_000824114.1 | hypothetical protein | VF |
| ISU84_RS21750 () | 4502931..4503479 | - | 549 | WP_000695557.1 | hypothetical protein | VF |
| ISU84_RS21755 () | 4503960..4504556 | - | 597 | WP_000044711.1 | Tyrosine recombinase XerC | VF |
| ISU84_RS21760 () | 4505034..4505636 | - | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| ISU84_RS21765 () | 4507092..4507808 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| ISU84_RS21770 () | 4507828..4508934 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| ISU84_RS21775 () | 4508999..4509979 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| ISU84_RS21780 () | 4510562..4511802 | - | 1241 | Protein_4272 | helicase YjhR | - |
| ISU84_RS21785 () | 4511918..4512163 | + | 246 | Protein_4273 | GNAT family N-acetyltransferase | - |
| ISU84_RS21790 () | 4512540..4512797 | + | 258 | WP_001054376.1 | hypothetical protein | Toxin Detail |
| ISU84_RS21795 () | 4512809..4513354 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| ISU84_RS21800 () | 4513410..4514156 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| ISU84_RS21805 () | 4514325..4514543 | + | 219 | Protein_4277 | hypothetical protein | - |
| ISU84_RS21810 () | 4514581..4514697 | + | 117 | Protein_4278 | VOC family protein | - |
| ISU84_RS21815 () | 4514942..4516063 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| ISU84_RS21820 () | 4516060..4516338 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| ISU84_RS21825 () | 4516350..4517663 | + | 1314 | WP_000460843.1 | galactitol-specific PTS transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20089 | HG738867 | 4419085..4430625 | 0.007 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA6279 | NC_000913 | 4533239..4545029 | 0.002 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21460 | NC_007779 | 4537919..4549709 | 0.002 | |
| Escherichia coli BW2952 | Genomic island | TA23876 | NC_012759 | 4469997..4481537 | 0.007 | |
| Escherichia coli DH1 | Genomic island | TA27426 | NC_017638 | 4513009..4524807 | 0.003 | |
| Escherichia coli BW25113 | Genomic island | TA48705 | NZ_CP009273 | 4523056..4534846 | 0.002 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68445 | NZ_CP017979 | 4432698..4444488 | 0.002 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285034 | NZ_HG738867 | 4419085..4430625 | 0.007 |