MGE detailed information
MGE type: Genomic_island MGE length: 11029 bp
Accession: NZ_CP080155 Location: 4322320..4333348 Organism: Escherichia coli strain PK8261 Replicon: chromosome
Accession: NZ_CP080155 Location: 4322320..4333348 Organism: Escherichia coli strain PK8261 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KZY07_RS20730 (4317799) | 4317799..4318302 | - | 504 | WP_000870592.1 | type 1 fimbria minor subunit FimG | - |
| KZY07_RS20735 (4318315) | 4318315..4318845 | - | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| KZY07_RS20740 (4318855) | 4318855..4321491 | - | 2637 | WP_000121002.1 | fimbrial usher FimD | - |
| KZY07_RS20745 (4321558) | 4321558..4322283 | - | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
| KZY07_RS20750 (4322320) | 4322320..4322859 | - | 540 | WP_000824114.1 | hypothetical protein | VF |
| KZY07_RS20755 (4322924) | 4322924..4323472 | - | 549 | WP_000695557.1 | hypothetical protein | VF |
| KZY07_RS20760 (4323954) | 4323954..4324550 | - | 597 | WP_000044711.1 | Tyrosine recombinase XerC | VF |
| KZY07_RS20765 (4325028) | 4325028..4325630 | - | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| KZY07_RS20770 (4327086) | 4327086..4327802 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| KZY07_RS20775 (4327822) | 4327822..4328928 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| KZY07_RS20780 (4328993) | 4328993..4329973 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| KZY07_RS27715 (4330083) | 4330083..4330288 | + | 206 | Protein_4091 | HNH endonuclease | - |
| KZY07_RS20785 (4330556) | 4330556..4331796 | - | 1241 | Protein_4092 | helicase YjhR | - |
| KZY07_RS27720 (4331912) | 4331912..4332043 | + | 132 | WP_001309182.1 | hypothetical protein | - |
| KZY07_RS20795 (4332534) | 4332534..4332791 | + | 258 | WP_001054376.1 | YjhX family toxin | Toxin Detail |
| KZY07_RS20800 (4332803) | 4332803..4333348 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| KZY07_RS20805 (4333404) | 4333404..4334150 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| KZY07_RS20810 (4334319) | 4334319..4334537 | + | 219 | Protein_4097 | hypothetical protein | - |
| KZY07_RS20815 (4334575) | 4334575..4334691 | + | 117 | Protein_4098 | VOC family protein | - |
| KZY07_RS20820 (4334936) | 4334936..4336057 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| KZY07_RS20825 (4336054) | 4336054..4336332 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB SgcB | - |
| KZY07_RS20830 (4336344) | 4336344..4337657 | + | 1314 | WP_000460843.1 | PTS sugar transporter subunit IIC SgcC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20089 | HG738867 | 4419085..4430625 | 0.007 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA6279 | NC_000913 | 4533239..4545029 | 0.002 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21460 | NC_007779 | 4537919..4549709 | 0.002 | |
| Escherichia coli BW2952 | Genomic island | TA23876 | NC_012759 | 4469997..4481537 | 0.007 | |
| Escherichia coli DH1 | Genomic island | TA27426 | NC_017638 | 4513009..4524807 | 0.003 | |
| Escherichia coli BW25113 | Genomic island | TA48705 | NZ_CP009273 | 4523056..4534846 | 0.002 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68445 | NZ_CP017979 | 4432698..4444488 | 0.002 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285034 | NZ_HG738867 | 4419085..4430625 | 0.007 |