MGE detailed information
MGE type: Genomic_island MGE length: 11791 bp
Accession: NZ_CP054665 Location: 4585030..4596820 Organism: Escherichia coli strain IGC_EcoliInv_1.1 Replicon: chromosome
Accession: NZ_CP054665 Location: 4585030..4596820 Organism: Escherichia coli strain IGC_EcoliInv_1.1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HUR94_RS22390 (4580721) | 4580721..4582034 | - | 1314 | WP_000460843.1 | PTS sugar transporter subunit IIC SgcC | - |
| HUR94_RS22395 (4582046) | 4582046..4582324 | - | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB SgcB | - |
| HUR94_RS22400 (4582321) | 4582321..4583442 | - | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| HUR94_RS22405 (4583687) | 4583687..4583803 | - | 117 | Protein_4358 | VOC family protein | - |
| HUR94_RS22410 (4583841) | 4583841..4584059 | - | 219 | Protein_4359 | hypothetical protein | - |
| HUR94_RS22415 (4584228) | 4584228..4584974 | - | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| HUR94_RS22420 (4585030) | 4585030..4585575 | - | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| HUR94_RS22425 (4585587) | 4585587..4585844 | - | 258 | WP_001054376.1 | YjhX family toxin | Toxin Detail |
| HUR94_RS22430 (4586335) | 4586335..4586466 | - | 132 | WP_001309182.1 | hypothetical protein | - |
| HUR94_RS22435 (4586582) | 4586582..4587822 | + | 1241 | Protein_4364 | helicase YjhR | - |
| HUR94_RS22440 (4588090) | 4588090..4588295 | - | 206 | Protein_4365 | HNH endonuclease | - |
| HUR94_RS22445 (4588405) | 4588405..4589385 | - | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| HUR94_RS22450 (4589450) | 4589450..4590556 | - | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| HUR94_RS22455 (4590576) | 4590576..4591292 | - | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| HUR94_RS22460 (4592748) | 4592748..4593350 | + | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| HUR94_RS22465 (4593828) | 4593828..4594424 | + | 597 | WP_000044711.1 | Tyrosine recombinase XerD | VF |
| HUR94_RS22470 (4594906) | 4594906..4595454 | + | 549 | WP_000695564.1 | Type-1 fimbrial protein, A chain | VF |
| HUR94_RS22475 (4595519) | 4595519..4596058 | + | 540 | WP_000824114.1 | putative major fimbrial subunit LpfA | VF |
| HUR94_RS22480 (4596095) | 4596095..4596820 | + | 726 | WP_000066547.1 | Chaperone protein FimC | VF |
| HUR94_RS22485 (4596887) | 4596887..4599523 | + | 2637 | WP_000121005.1 | fimbrial usher FimD | - |
| HUR94_RS22490 (4599533) | 4599533..4600063 | + | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| HUR94_RS22495 (4600076) | 4600076..4600579 | + | 504 | WP_000870592.1 | type 1 fimbria minor subunit FimG | - |
| HUR94_RS22500 (4600599) | 4600599..4601501 | + | 903 | WP_000832247.1 | type 1 fimbria D-mannose specific adhesin FimH | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20089 | HG738867 | 4419085..4430625 | 0.004 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA6279 | NC_000913 | 4533239..4545029 | 0 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21460 | NC_007779 | 4537919..4549709 | 0 | |
| Escherichia coli BW2952 | Genomic island | TA23876 | NC_012759 | 4469997..4481537 | 0.004 | |
| Escherichia coli DH1 | Genomic island | TA27426 | NC_017638 | 4513009..4524807 | 0 | |
| Escherichia coli BW25113 | Genomic island | TA48705 | NZ_CP009273 | 4523056..4534846 | 0 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68445 | NZ_CP017979 | 4432698..4444488 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285034 | NZ_HG738867 | 4419085..4430625 | 0.004 |