MGE detailed information
MGE type: Genomic_island MGE length: 11791 bp
Accession: NZ_CP011343 Location: 4513243..4525033 Organism: Escherichia coli K-12 substr. GM4792 Replicon: chromosome
Accession: NZ_CP011343 Location: 4513243..4525033 Organism: Escherichia coli K-12 substr. GM4792 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| U069_RS22245 () | 4508934..4510247 | - | 1314 | WP_000460843.1 | galactitol-specific PTS transporter subunit IIC | - |
| U069_RS22250 () | 4510259..4510537 | - | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| U069_RS22255 () | 4510534..4511655 | - | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| U069_RS25985 () | 4511900..4512016 | - | 117 | Protein_4240 | VOC family protein | - |
| U069_RS25175 () | 4512054..4512272 | - | 219 | Protein_4241 | hypothetical protein | - |
| U069_RS22260 () | 4512441..4513187 | - | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| U069_RS22265 () | 4513243..4513788 | - | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| U069_RS22270 () | 4513800..4514057 | - | 258 | WP_001054376.1 | hypothetical protein | Toxin Detail |
| U069_RS25625 () | 4514434..4514679 | - | 246 | Protein_4245 | GNAT family N-acetyltransferase | - |
| U069_RS22285 () | 4514795..4516035 | + | 1241 | Protein_4246 | helicase YjhR | - |
| U069_RS22290 () | 4516618..4517598 | - | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| U069_RS22295 () | 4517663..4518769 | - | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| U069_RS22300 () | 4518789..4519505 | - | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| U069_RS22315 () | 4520961..4521563 | + | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| U069_RS22320 () | 4522041..4522637 | + | 597 | WP_000044711.1 | Tyrosine recombinase XerC | VF |
| U069_RS22330 () | 4523119..4523667 | + | 549 | WP_000695564.1 | hypothetical protein | VF |
| U069_RS22335 () | 4523732..4524271 | + | 540 | WP_000824114.1 | hypothetical protein | VF |
| U069_RS22340 () | 4524308..4525033 | + | 726 | WP_000066547.1 | hypothetical protein | VF |
| U069_RS22345 () | 4525100..4527736 | + | 2637 | WP_000121005.1 | fimbrial usher FimD | - |
| U069_RS22350 () | 4527746..4528276 | + | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| U069_RS22355 () | 4528289..4528792 | + | 504 | WP_000870592.1 | type 1 fimbria minor subunit FimG | - |
| U069_RS22360 () | 4528812..4529714 | + | 903 | WP_000832247.1 | type 1 fimbria D-mannose specific adhesin FimH | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20089 | HG738867 | 4419085..4430625 | 0.004 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA6279 | NC_000913 | 4533239..4545029 | 0 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21460 | NC_007779 | 4537919..4549709 | 0 | |
| Escherichia coli BW2952 | Genomic island | TA23876 | NC_012759 | 4469997..4481537 | 0.004 | |
| Escherichia coli DH1 | Genomic island | TA27426 | NC_017638 | 4513009..4524807 | 0 | |
| Escherichia coli BW25113 | Genomic island | TA48705 | NZ_CP009273 | 4523056..4534846 | 0 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68445 | NZ_CP017979 | 4432698..4444488 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285034 | NZ_HG738867 | 4419085..4430625 | 0.004 |