MGE detailed information
MGE type: Genomic_island MGE length: 11791 bp
Accession: NZ_CP019629 Location: 4534837..4546627 Organism: Escherichia coli strain MGY Replicon: chromosome
Accession: NZ_CP019629 Location: 4534837..4546627 Organism: Escherichia coli strain MGY Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BWL12_RS23530 () | 4530528..4531841 | - | 1314 | WP_000460843.1 | galactitol-specific PTS transporter subunit IIC | - |
| BWL12_RS23535 () | 4531853..4532131 | - | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| BWL12_RS23540 () | 4532128..4533249 | - | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| BWL12_RS24920 () | 4533494..4533610 | - | 117 | Protein_4271 | VOC family protein | - |
| BWL12_RS23550 () | 4533648..4533866 | - | 219 | Protein_4272 | hypothetical protein | - |
| BWL12_RS23555 () | 4534035..4534781 | - | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| BWL12_RS23560 () | 4534837..4535382 | - | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| BWL12_RS23565 () | 4535394..4535651 | - | 258 | WP_001054376.1 | hypothetical protein | Toxin Detail |
| BWL12_RS24625 () | 4536028..4536273 | - | 246 | Protein_4276 | GNAT family N-acetyltransferase | - |
| BWL12_RS23580 () | 4536389..4537629 | + | 1241 | Protein_4277 | helicase YjhR | - |
| BWL12_RS23590 () | 4538212..4539192 | - | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| BWL12_RS23595 () | 4539257..4540363 | - | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| BWL12_RS23600 () | 4540383..4541099 | - | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| BWL12_RS23615 () | 4542555..4543157 | + | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| BWL12_RS23620 () | 4543635..4544231 | + | 597 | WP_000044711.1 | Tyrosine recombinase XerD | VF |
| BWL12_RS23635 () | 4544713..4545261 | + | 549 | WP_000695564.1 | Type-1 fimbrial protein, A chain | VF |
| BWL12_RS23640 () | 4545326..4545865 | + | 540 | WP_000824114.1 | putative major fimbrial subunit LpfA | VF |
| BWL12_RS23645 () | 4545902..4546627 | + | 726 | WP_000066547.1 | Chaperone protein FimC | VF |
| BWL12_RS23650 () | 4546694..4549330 | + | 2637 | WP_000121005.1 | fimbrial usher FimD | - |
| BWL12_RS23655 () | 4549340..4549870 | + | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| BWL12_RS23660 () | 4549883..4550386 | + | 504 | WP_000870592.1 | type 1 fimbria minor subunit FimG | - |
| BWL12_RS23665 () | 4550406..4551308 | + | 903 | WP_000832247.1 | type 1 fimbria D-mannose specific adhesin FimH | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20089 | HG738867 | 4419085..4430625 | 0.004 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA6279 | NC_000913 | 4533239..4545029 | 0 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21460 | NC_007779 | 4537919..4549709 | 0 | |
| Escherichia coli BW2952 | Genomic island | TA23876 | NC_012759 | 4469997..4481537 | 0.004 | |
| Escherichia coli DH1 | Genomic island | TA27426 | NC_017638 | 4513009..4524807 | 0 | |
| Escherichia coli BW25113 | Genomic island | TA48705 | NZ_CP009273 | 4523056..4534846 | 0 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68445 | NZ_CP017979 | 4432698..4444488 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285034 | NZ_HG738867 | 4419085..4430625 | 0.004 |