NZ_CP091682573406..585196

MGE detailed information

MGE type: Genomic_island        MGE length: 11791 bp
Accession: NZ_CP091682        Location: 573406..585196         Organism: Escherichia coli strain KKo003       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
L6L54_RS02720 (569097) 569097..570410 - 1314 WP_000460843.1 PTS sugar transporter subunit IIC SgcC -
L6L54_RS02725 (570422) 570422..570700 - 279 WP_000722973.1 PTS sugar transporter subunit IIB SgcB -
L6L54_RS02730 (570697) 570697..571818 - 1122 WP_000010829.1 M42 family metallopeptidase -
L6L54_RS02735 (572063) 572063..572179 - 117 Protein_531 VOC family protein -
L6L54_RS02740 (572217) 572217..572435 - 219 Protein_532 hypothetical protein -
L6L54_RS02745 (572604) 572604..573350 - 747 WP_000354251.1 class I SAM-dependent methyltransferase -
L6L54_RS02750 (573406) 573406..573951 - 546 WP_001540600.1 N-acetyltransferase Antitoxin Detail
L6L54_RS02755 (573963) 573963..574220 - 258 WP_001054376.1 YjhX family toxin Toxin Detail
L6L54_RS02760 (574711) 574711..574842 - 132 WP_001309182.1 hypothetical protein -
L6L54_RS02765 (574958) 574958..576198 + 1241 Protein_537 helicase YjhR -
L6L54_RS02770 (576466) 576466..576671 - 206 Protein_538 HNH endonuclease -
L6L54_RS02775 (576781) 576781..577761 - 981 WP_000991438.1 9-O-acetyl-N-acetylneuraminic acid deacetylase -
L6L54_RS02780 (577826) 577826..578932 - 1107 WP_001774143.1 N-acetylneuraminate epimerase -
L6L54_RS02785 (578952) 578952..579668 - 717 WP_001295734.1 N-acetylneuraminic acid outer membrane channel NanC -
L6L54_RS02790 (581124) 581124..581726 + 603 WP_000790583.1 Tyrosine recombinase XerC VF
L6L54_RS02795 (582204) 582204..582800 + 597 WP_000044711.1 Tyrosine recombinase XerD VF
L6L54_RS02800 (583282) 583282..583830 + 549 WP_001774144.1 Type-1 fimbrial protein, A chain VF
L6L54_RS02805 (583895) 583895..584434 + 540 WP_000824114.1 putative major fimbrial subunit LpfA VF
L6L54_RS02810 (584471) 584471..585196 + 726 WP_000066560.1 Chaperone protein FimC VF
L6L54_RS02815 (585263) 585263..587899 + 2637 WP_000121002.1 fimbrial usher FimD -
L6L54_RS02820 (587909) 587909..588439 + 531 WP_001244827.1 type 1 fimbria minor subunit FimF -
L6L54_RS02825 (588452) 588452..588955 + 504 WP_000870592.1 type 1 fimbria minor subunit FimG -
L6L54_RS02830 (588975) 588975..589877 + 903 WP_001774145.1 type 1 fimbria D-mannose specific adhesin FimH -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Escherichia coli str. K-12 substr. MC4100 Genomic island TA20089 HG738867 4419085..4430625 0.005
Escherichia coli str. K-12 substr. MG1655 Genomic island TA6279 NC_000913 4533239..4545029 0.001
Escherichia coli str. K-12 substr. W3110 Genomic island TA21460 NC_007779 4537919..4549709 0.001
Escherichia coli BW2952 Genomic island TA23876 NC_012759 4469997..4481537 0.005
Escherichia coli DH1 Genomic island TA27426 NC_017638 4513009..4524807 0.001
Escherichia coli BW25113 Genomic island TA48705 NZ_CP009273 4523056..4534846 0.001
Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 Genomic island TA68445 NZ_CP017979 4432698..4444488 0.001
Escherichia coli str. K-12 substr. MC4100 strain K-12 Genomic island TA285034 NZ_HG738867 4419085..4430625 0.005