NZ_CP0113244496888..4508678

MGE detailed information

MGE type: Genomic_island        MGE length: 11791 bp
Accession: NZ_CP011324        Location: 4496888..4508678         Organism: Escherichia coli strain SQ2203       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
CS35_RS22195 () 4492579..4493892 - 1314 WP_000460843.1 galactitol-specific PTS transporter subunit IIC -
CS35_RS22200 () 4493904..4494182 - 279 WP_000722973.1 PTS sugar transporter subunit IIB -
CS35_RS22205 () 4494179..4495300 - 1122 WP_000010829.1 M42 family metallopeptidase -
CS35_RS25835 () 4495545..4495661 - 117 Protein_4239 VOC family protein -
CS35_RS25205 () 4495699..4495917 - 219 Protein_4240 hypothetical protein -
CS35_RS22210 () 4496086..4496832 - 747 WP_000354251.1 class I SAM-dependent methyltransferase -
CS35_RS22215 () 4496888..4497433 - 546 WP_001309181.1 N-acetyltransferase Antitoxin Detail
CS35_RS22220 () 4497445..4497702 - 258 WP_001054376.1 hypothetical protein Toxin Detail
CS35_RS25645 () 4498079..4498324 - 246 Protein_4244 GNAT family N-acetyltransferase -
CS35_RS22235 () 4498440..4499680 + 1241 Protein_4245 helicase YjhR -
CS35_RS22240 () 4500263..4501243 - 981 WP_000991438.1 9-O-acetyl-N-acetylneuraminic acid deacetylase -
CS35_RS22245 () 4501308..4502414 - 1107 WP_001309184.1 N-acetylneuraminate epimerase -
CS35_RS22250 () 4502434..4503150 - 717 WP_001295734.1 N-acetylneuraminic acid outer membrane channel NanC -
CS35_RS22265 () 4504606..4505208 + 603 WP_000790583.1 Tyrosine recombinase XerC VF
CS35_RS22270 () 4505686..4506282 + 597 WP_000044711.1 Tyrosine recombinase XerD VF
CS35_RS22280 () 4506764..4507312 + 549 WP_000695564.1 Type-1 fimbrial protein, A chain VF
CS35_RS22285 () 4507377..4507916 + 540 WP_000824114.1 putative major fimbrial subunit LpfA VF
CS35_RS22290 () 4507953..4508678 + 726 WP_000066547.1 Chaperone protein FimC VF
CS35_RS22295 () 4508745..4511381 + 2637 WP_000121005.1 fimbrial usher FimD -
CS35_RS22300 () 4511391..4511921 + 531 WP_001244827.1 type 1 fimbria minor subunit FimF -
CS35_RS22305 () 4511934..4512437 + 504 WP_000870592.1 type 1 fimbria minor subunit FimG -
CS35_RS22310 () 4512457..4513359 + 903 WP_000832247.1 type 1 fimbria D-mannose specific adhesin FimH -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Escherichia coli str. K-12 substr. MC4100 Genomic island TA20089 HG738867 4419085..4430625 0.004
Escherichia coli str. K-12 substr. MG1655 Genomic island TA6279 NC_000913 4533239..4545029 0
Escherichia coli str. K-12 substr. W3110 Genomic island TA21460 NC_007779 4537919..4549709 0
Escherichia coli BW2952 Genomic island TA23876 NC_012759 4469997..4481537 0.004
Escherichia coli DH1 Genomic island TA27426 NC_017638 4513009..4524807 0
Escherichia coli BW25113 Genomic island TA48705 NZ_CP009273 4523056..4534846 0
Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 Genomic island TA68445 NZ_CP017979 4432698..4444488 0
Escherichia coli str. K-12 substr. MC4100 strain K-12 Genomic island TA285034 NZ_HG738867 4419085..4430625 0.004