NZ_CP0263514533240..4545030

MGE detailed information

MGE type: Genomic_island        MGE length: 11791 bp
Accession: NZ_CP026351        Location: 4533240..4545030         Organism: Escherichia coli strain 5A       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
C2R12_RS23390 () 4528931..4530244 - 1314 WP_000460843.1 galactitol-specific PTS transporter subunit IIC -
C2R12_RS23395 () 4530256..4530534 - 279 WP_000722973.1 PTS sugar transporter subunit IIB -
C2R12_RS23400 () 4530531..4531652 - 1122 WP_000010829.1 M42 family metallopeptidase -
C2R12_RS24380 () 4531897..4532013 - 117 Protein_4264 VOC family protein -
C2R12_RS23405 () 4532051..4532269 - 219 Protein_4265 hypothetical protein -
C2R12_RS23410 () 4532438..4533184 - 747 WP_000354251.1 class I SAM-dependent methyltransferase -
C2R12_RS23415 () 4533240..4533785 - 546 WP_001309181.1 N-acetyltransferase Antitoxin Detail
C2R12_RS23420 () 4533797..4534054 - 258 WP_001054376.1 hypothetical protein Toxin Detail
C2R12_RS23430 () 4534431..4534676 - 246 Protein_4269 GNAT family N-acetyltransferase -
C2R12_RS23440 () 4534792..4536032 + 1241 Protein_4270 helicase YjhR -
C2R12_RS23445 () 4536615..4537595 - 981 WP_000991438.1 9-O-acetyl-N-acetylneuraminic acid deacetylase -
C2R12_RS23450 () 4537660..4538766 - 1107 WP_001309184.1 N-acetylneuraminate epimerase -
C2R12_RS23455 () 4538786..4539502 - 717 WP_001295734.1 N-acetylneuraminic acid outer membrane channel NanC -
C2R12_RS23470 () 4540958..4541560 + 603 WP_000790583.1 Tyrosine recombinase XerC VF
C2R12_RS23475 () 4542038..4542634 + 597 WP_000044711.1 Tyrosine recombinase XerC VF
C2R12_RS23485 () 4543116..4543664 + 549 WP_000695564.1 hypothetical protein VF
C2R12_RS23490 () 4543729..4544268 + 540 WP_000824114.1 hypothetical protein VF
C2R12_RS23495 () 4544305..4545030 + 726 WP_000066547.1 hypothetical protein VF
C2R12_RS23500 () 4545097..4547733 + 2637 WP_000121005.1 fimbrial usher FimD -
C2R12_RS23505 () 4547743..4548273 + 531 WP_001244827.1 type 1 fimbria minor subunit FimF -
C2R12_RS23510 () 4548286..4548789 + 504 WP_000870592.1 type 1 fimbria minor subunit FimG -
C2R12_RS23515 () 4548809..4549711 + 903 WP_000832247.1 type 1 fimbria D-mannose specific adhesin FimH -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Escherichia coli str. K-12 substr. MC4100 Genomic island TA20089 HG738867 4419085..4430625 0.004
Escherichia coli str. K-12 substr. MG1655 Genomic island TA6279 NC_000913 4533239..4545029 0
Escherichia coli str. K-12 substr. W3110 Genomic island TA21460 NC_007779 4537919..4549709 0
Escherichia coli BW2952 Genomic island TA23876 NC_012759 4469997..4481537 0.004
Escherichia coli DH1 Genomic island TA27426 NC_017638 4513009..4524807 0
Escherichia coli BW25113 Genomic island TA48705 NZ_CP009273 4523056..4534846 0
Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 Genomic island TA68445 NZ_CP017979 4432698..4444488 0
Escherichia coli str. K-12 substr. MC4100 strain K-12 Genomic island TA285034 NZ_HG738867 4419085..4430625 0.004