MGE detailed information
MGE type: Genomic_island MGE length: 11791 bp
Accession: NZ_CP008801 Location: 4610098..4621888 Organism: Escherichia coli KLY Replicon: chromosome
Accession: NZ_CP008801 Location: 4610098..4621888 Organism: Escherichia coli KLY Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HQ24_RS22795 () | 4605789..4607102 | - | 1314 | WP_000460843.1 | galactitol-specific PTS transporter subunit IIC | - |
| HQ24_RS22800 () | 4607114..4607392 | - | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| HQ24_RS22805 () | 4607389..4608510 | - | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| HQ24_RS26670 () | 4608755..4608871 | - | 117 | Protein_4310 | VOC family protein | - |
| HQ24_RS25955 () | 4608909..4609127 | - | 219 | Protein_4311 | hypothetical protein | - |
| HQ24_RS22810 () | 4609296..4610042 | - | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| HQ24_RS22815 () | 4610098..4610643 | - | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| HQ24_RS22820 () | 4610655..4610912 | - | 258 | WP_001054376.1 | hypothetical protein | Toxin Detail |
| HQ24_RS26435 () | 4611289..4611534 | - | 246 | Protein_4315 | GNAT family N-acetyltransferase | - |
| HQ24_RS22835 () | 4611650..4612890 | + | 1241 | Protein_4316 | helicase YjhR | - |
| HQ24_RS22840 () | 4613473..4614453 | - | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| HQ24_RS22845 () | 4614518..4615624 | - | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| HQ24_RS22850 () | 4615644..4616360 | - | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| HQ24_RS22865 () | 4617816..4618418 | + | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| HQ24_RS22870 () | 4618896..4619492 | + | 597 | WP_000044711.1 | Tyrosine recombinase XerC | VF |
| HQ24_RS22880 () | 4619974..4620522 | + | 549 | WP_000695564.1 | hypothetical protein | VF |
| HQ24_RS22885 () | 4620587..4621126 | + | 540 | WP_000824114.1 | hypothetical protein | VF |
| HQ24_RS22890 () | 4621163..4621888 | + | 726 | WP_000066547.1 | hypothetical protein | VF |
| HQ24_RS22895 () | 4621955..4624591 | + | 2637 | WP_000121005.1 | fimbrial usher FimD | - |
| HQ24_RS22900 () | 4624601..4625131 | + | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| HQ24_RS22905 () | 4625144..4625647 | + | 504 | WP_000870592.1 | type 1 fimbria minor subunit FimG | - |
| HQ24_RS22910 () | 4625667..4626569 | + | 903 | WP_000832247.1 | type 1 fimbria D-mannose specific adhesin FimH | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20089 | HG738867 | 4419085..4430625 | 0.004 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA6279 | NC_000913 | 4533239..4545029 | 0 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21460 | NC_007779 | 4537919..4549709 | 0 | |
| Escherichia coli BW2952 | Genomic island | TA23876 | NC_012759 | 4469997..4481537 | 0.004 | |
| Escherichia coli DH1 | Genomic island | TA27426 | NC_017638 | 4513009..4524807 | 0 | |
| Escherichia coli BW25113 | Genomic island | TA48705 | NZ_CP009273 | 4523056..4534846 | 0 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68445 | NZ_CP017979 | 4432698..4444488 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285034 | NZ_HG738867 | 4419085..4430625 | 0.004 |