MGE detailed information
MGE type: Genomic_island MGE length: 11791 bp
Accession: NZ_CP116103 Location: 574507..586297 Organism: Escherichia coli strain DETEC-P836 Replicon: chromosome
Accession: NZ_CP116103 Location: 574507..586297 Organism: Escherichia coli strain DETEC-P836 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PIB67_RS02730 (570198) | 570198..571511 | - | 1314 | WP_000460843.1 | PTS sugar transporter subunit IIC SgcC | - |
| PIB67_RS02735 (571523) | 571523..571801 | - | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB SgcB | - |
| PIB67_RS02740 (571798) | 571798..572919 | - | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| PIB67_RS02745 (573164) | 573164..573280 | - | 117 | Protein_531 | VOC family protein | - |
| PIB67_RS02750 (573318) | 573318..573536 | - | 219 | Protein_532 | hypothetical protein | - |
| PIB67_RS02755 (573705) | 573705..574451 | - | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| PIB67_RS02760 (574507) | 574507..575052 | - | 546 | WP_001540600.1 | N-acetyltransferase | Antitoxin Detail |
| PIB67_RS02765 (575064) | 575064..575321 | - | 258 | WP_001054376.1 | YjhX family toxin | Toxin Detail |
| PIB67_RS02770 (575812) | 575812..575943 | - | 132 | WP_001309182.1 | hypothetical protein | - |
| PIB67_RS02775 (576059) | 576059..577299 | + | 1241 | Protein_537 | helicase YjhR | - |
| PIB67_RS02780 (577567) | 577567..577772 | - | 206 | Protein_538 | HNH endonuclease | - |
| PIB67_RS02785 (577882) | 577882..578862 | - | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| PIB67_RS02790 (578927) | 578927..580033 | - | 1107 | WP_001774143.1 | N-acetylneuraminate epimerase | - |
| PIB67_RS02795 (580053) | 580053..580769 | - | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| PIB67_RS02800 (582225) | 582225..582827 | + | 603 | WP_000790583.1 | ISKra4 family transposase ISCep1 | VF |
| PIB67_RS02805 (583305) | 583305..583901 | + | 597 | WP_000044711.1 | ISKra4 family transposase ISCep1 | VF |
| PIB67_RS02810 (584383) | 584383..584931 | + | 549 | WP_001774144.1 | Type-1 fimbrial protein, A chain | VF |
| PIB67_RS02815 (584996) | 584996..585535 | + | 540 | WP_000824114.1 | putative major fimbrial subunit LpfA | VF |
| PIB67_RS02820 (585572) | 585572..586297 | + | 726 | WP_000066560.1 | Chaperone protein FimC | VF |
| PIB67_RS02825 (586364) | 586364..589000 | + | 2637 | WP_000121002.1 | fimbrial usher FimD | - |
| PIB67_RS02830 (589010) | 589010..589540 | + | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| PIB67_RS02835 (589553) | 589553..590056 | + | 504 | WP_000870592.1 | type 1 fimbria minor subunit FimG | - |
| PIB67_RS02840 (590076) | 590076..590978 | + | 903 | WP_001774145.1 | type 1 fimbria D-mannose specific adhesin FimH | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20089 | HG738867 | 4419085..4430625 | 0.005 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA6279 | NC_000913 | 4533239..4545029 | 0.001 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21460 | NC_007779 | 4537919..4549709 | 0.001 | |
| Escherichia coli BW2952 | Genomic island | TA23876 | NC_012759 | 4469997..4481537 | 0.005 | |
| Escherichia coli DH1 | Genomic island | TA27426 | NC_017638 | 4513009..4524807 | 0.001 | |
| Escherichia coli BW25113 | Genomic island | TA48705 | NZ_CP009273 | 4523056..4534846 | 0.001 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68445 | NZ_CP017979 | 4432698..4444488 | 0.001 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285034 | NZ_HG738867 | 4419085..4430625 | 0.005 |