MGE detailed information
MGE type: Genomic_island MGE length: 11791 bp
Accession: NZ_CP054214 Location: 574039..585829 Organism: Escherichia coli strain EcPF40 Replicon: chromosome
Accession: NZ_CP054214 Location: 574039..585829 Organism: Escherichia coli strain EcPF40 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HR076_RS02715 () | 569730..571043 | - | 1314 | WP_000460843.1 | galactitol-specific PTS transporter subunit IIC | - |
| HR076_RS02720 () | 571055..571333 | - | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| HR076_RS02725 () | 571330..572451 | - | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| HR076_RS02730 () | 572850..573068 | - | 219 | Protein_528 | hypothetical protein | - |
| HR076_RS02735 () | 573237..573983 | - | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| HR076_RS02740 () | 574039..574584 | - | 546 | WP_001540600.1 | N-acetyltransferase | Antitoxin Detail |
| HR076_RS02745 () | 574596..574853 | - | 258 | WP_001054376.1 | hypothetical protein | Toxin Detail |
| HR076_RS02750 () | 575230..575475 | - | 246 | Protein_532 | GNAT family N-acetyltransferase | - |
| HR076_RS02755 () | 575845..576831 | + | 987 | WP_001323209.1 | hypothetical protein | - |
| HR076_RS02760 () | 577414..578394 | - | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| HR076_RS02765 () | 578459..579565 | - | 1107 | WP_001774143.1 | N-acetylneuraminate epimerase | - |
| HR076_RS02770 () | 579585..580301 | - | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| HR076_RS02775 () | 581757..582359 | + | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| HR076_RS02780 () | 582837..583433 | + | 597 | WP_000044711.1 | Tyrosine recombinase XerD | VF |
| HR076_RS02785 () | 583915..584463 | + | 549 | WP_001774144.1 | Type-1 fimbrial protein, A chain | VF |
| HR076_RS02790 () | 584528..585067 | + | 540 | WP_000824114.1 | putative major fimbrial subunit LpfA | VF |
| HR076_RS02795 () | 585104..585829 | + | 726 | WP_000066560.1 | Chaperone protein FimC | VF |
| HR076_RS02800 () | 585896..588532 | + | 2637 | WP_000121002.1 | fimbrial usher FimD | - |
| HR076_RS02805 () | 588542..589072 | + | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| HR076_RS02810 () | 589085..589588 | + | 504 | WP_000870592.1 | type 1 fimbria minor subunit FimG | - |
| HR076_RS02815 () | 589608..590510 | + | 903 | WP_001774145.1 | type 1 fimbria D-mannose specific adhesin FimH | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20089 | HG738867 | 4419085..4430625 | 0.005 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA6279 | NC_000913 | 4533239..4545029 | 0.001 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21460 | NC_007779 | 4537919..4549709 | 0.001 | |
| Escherichia coli BW2952 | Genomic island | TA23876 | NC_012759 | 4469997..4481537 | 0.005 | |
| Escherichia coli DH1 | Genomic island | TA27426 | NC_017638 | 4513009..4524807 | 0.001 | |
| Escherichia coli BW25113 | Genomic island | TA48705 | NZ_CP009273 | 4523056..4534846 | 0.001 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68445 | NZ_CP017979 | 4432698..4444488 | 0.001 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285034 | NZ_HG738867 | 4419085..4430625 | 0.005 |