MGE detailed information
MGE type: Genomic_island MGE length: 11772 bp
Accession: NZ_CP030240 Location: 2096258..2108029 Organism: Escherichia coli strain ER1709 Replicon: chromosome
Accession: NZ_CP030240 Location: 2096258..2108029 Organism: Escherichia coli strain ER1709 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQ225_RS10045 () | 2091949..2093262 | - | 1314 | WP_000460843.1 | galactitol-specific PTS transporter subunit IIC | - |
| DQ225_RS10050 () | 2093274..2093552 | - | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| DQ225_RS10055 () | 2093549..2094670 | - | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| DQ225_RS22615 () | 2094915..2095031 | - | 117 | Protein_1942 | VOC family protein | - |
| DQ225_RS10060 () | 2095069..2095287 | - | 219 | Protein_1943 | hypothetical protein | - |
| DQ225_RS10065 () | 2095456..2096202 | - | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| DQ225_RS10070 () | 2096258..2096803 | - | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| DQ225_RS10075 () | 2096815..2097072 | - | 258 | WP_001054376.1 | hypothetical protein | Toxin Detail |
| DQ225_RS10080 () | 2097449..2097694 | - | 246 | Protein_1947 | GNAT family N-acetyltransferase | - |
| DQ225_RS10090 () | 2097810..2099050 | + | 1241 | Protein_1948 | helicase YjhR | - |
| DQ225_RS10095 () | 2099633..2100613 | - | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| DQ225_RS10100 () | 2100678..2101784 | - | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| DQ225_RS10105 () | 2101804..2102520 | - | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| DQ225_RS10110 () | 2103976..2104578 | + | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| DQ225_RS10115 () | 2105056..2105652 | + | 597 | WP_000044711.1 | Tyrosine recombinase XerD | VF |
| DQ225_RS10120 () | 2106133..2106681 | + | 549 | WP_000695564.1 | Type-1 fimbrial protein, A chain | VF |
| DQ225_RS10125 () | 2106746..2107285 | + | 540 | WP_000824114.1 | putative major fimbrial subunit LpfA | VF |
| DQ225_RS10130 () | 2107322..2108029 | + | 708 | WP_123038978.1 | Chaperone protein FimC | VF |
| DQ225_RS10135 () | 2108113..2110748 | + | 2636 | Protein_1957 | fimbrial usher FimD | - |
| DQ225_RS10140 () | 2110758..2111288 | + | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| DQ225_RS10145 () | 2111301..2111804 | + | 504 | WP_000870592.1 | type 1 fimbria minor subunit FimG | - |
| DQ225_RS10150 () | 2111824..2112726 | + | 903 | WP_000832247.1 | type 1 fimbria D-mannose specific adhesin FimH | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20089 | HG738867 | 4419085..4430625 | 0.004 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA6279 | NC_000913 | 4533239..4545029 | 0 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21460 | NC_007779 | 4537919..4549709 | 0 | |
| Escherichia coli BW2952 | Genomic island | TA23876 | NC_012759 | 4469997..4481537 | 0.004 | |
| Escherichia coli DH1 | Genomic island | TA27426 | NC_017638 | 4513009..4524807 | 0 | |
| Escherichia coli BW25113 | Genomic island | TA48705 | NZ_CP009273 | 4523056..4534846 | 0 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68445 | NZ_CP017979 | 4432698..4444488 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285034 | NZ_HG738867 | 4419085..4430625 | 0.004 |