MGE detailed information
MGE type: Genomic_island MGE length: 11791 bp
Accession: NZ_LM993812 Location: 4476447..4488237 Organism: Escherichia coli strain K-12 substr. HMS174 Replicon: chromosome
Accession: NZ_LM993812 Location: 4476447..4488237 Organism: Escherichia coli strain K-12 substr. HMS174 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ECHMS174_RS22060 () | 4472138..4473451 | - | 1314 | WP_000460843.1 | galactitol-specific PTS transporter subunit IIC | - |
| ECHMS174_RS22065 () | 4473463..4473741 | - | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| ECHMS174_RS22070 () | 4473738..4474859 | - | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| ECHMS174_RS25775 () | 4475104..4475220 | - | 117 | Protein_4180 | VOC family protein | - |
| ECHMS174_RS25115 () | 4475258..4475476 | - | 219 | Protein_4181 | hypothetical protein | - |
| ECHMS174_RS22075 () | 4475645..4476391 | - | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| ECHMS174_RS22080 () | 4476447..4476992 | - | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| ECHMS174_RS22085 () | 4477004..4477261 | - | 258 | WP_001054376.1 | hypothetical protein | Toxin Detail |
| ECHMS174_RS25575 () | 4477638..4477883 | - | 246 | Protein_4185 | GNAT family N-acetyltransferase | - |
| ECHMS174_RS22100 () | 4477999..4479239 | + | 1241 | Protein_4186 | helicase YjhR | - |
| ECHMS174_RS22105 () | 4479822..4480802 | - | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| ECHMS174_RS22110 () | 4480867..4481973 | - | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| ECHMS174_RS22115 () | 4481993..4482709 | - | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| ECHMS174_RS22130 () | 4484165..4484767 | + | 603 | WP_000790583.1 | hypothetical protein | VF |
| ECHMS174_RS22135 () | 4485245..4485841 | + | 597 | WP_000044711.1 | hypothetical protein | VF |
| ECHMS174_RS22145 () | 4486323..4486871 | + | 549 | WP_000695564.1 | hypothetical protein | VF |
| ECHMS174_RS22150 () | 4486936..4487475 | + | 540 | WP_000824114.1 | hypothetical protein | VF |
| ECHMS174_RS22155 () | 4487512..4488237 | + | 726 | WP_000066547.1 | hypothetical protein | VF |
| ECHMS174_RS22160 () | 4488304..4490940 | + | 2637 | WP_000121005.1 | fimbrial usher FimD | - |
| ECHMS174_RS22165 () | 4490950..4491480 | + | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| ECHMS174_RS22170 () | 4491493..4491996 | + | 504 | WP_000870592.1 | type 1 fimbria minor subunit FimG | - |
| ECHMS174_RS22175 () | 4492016..4492918 | + | 903 | WP_000832247.1 | type 1 fimbria D-mannose specific adhesin FimH | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20089 | HG738867 | 4419085..4430625 | 0.004 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA6279 | NC_000913 | 4533239..4545029 | 0 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21460 | NC_007779 | 4537919..4549709 | 0 | |
| Escherichia coli BW2952 | Genomic island | TA23876 | NC_012759 | 4469997..4481537 | 0.004 | |
| Escherichia coli DH1 | Genomic island | TA27426 | NC_017638 | 4513009..4524807 | 0 | |
| Escherichia coli BW25113 | Genomic island | TA48705 | NZ_CP009273 | 4523056..4534846 | 0 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68445 | NZ_CP017979 | 4432698..4444488 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285034 | NZ_HG738867 | 4419085..4430625 | 0.004 |