MGE detailed information
MGE type: Genomic_island MGE length: 11792 bp
Accession: NZ_CP069935 Location: 4522868..4534659 Organism: Escherichia coli strain FDAARGOS_1302 Replicon: chromosome
Accession: NZ_CP069935 Location: 4522868..4534659 Organism: Escherichia coli strain FDAARGOS_1302 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6K32_RS21895 (4518559) | 4518559..4519872 | - | 1314 | WP_000460843.1 | PTS sugar transporter subunit IIC SgcC | - |
| I6K32_RS21900 (4519884) | 4519884..4520162 | - | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB SgcB | - |
| I6K32_RS21905 (4520159) | 4520159..4521280 | - | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| I6K32_RS21910 (4521525) | 4521525..4521641 | - | 117 | Protein_4318 | VOC family protein | - |
| I6K32_RS21915 (4521679) | 4521679..4521897 | - | 219 | Protein_4319 | hypothetical protein | - |
| I6K32_RS21920 (4522066) | 4522066..4522812 | - | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| I6K32_RS21925 (4522868) | 4522868..4523413 | - | 546 | WP_001350781.1 | N-acetyltransferase | Antitoxin Detail |
| I6K32_RS21930 (4523425) | 4523425..4523682 | - | 258 | WP_001054376.1 | YjhX family toxin | Toxin Detail |
| I6K32_RS25225 (4524173) | 4524173..4524304 | - | 132 | WP_001309182.1 | hypothetical protein | - |
| I6K32_RS21940 (4524420) | 4524420..4525660 | + | 1241 | Protein_4324 | helicase YjhR | - |
| I6K32_RS25230 (4525928) | 4525928..4526133 | - | 206 | Protein_4325 | HNH endonuclease | - |
| I6K32_RS21945 (4526243) | 4526243..4527223 | - | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| I6K32_RS21950 (4527288) | 4527288..4528394 | - | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| I6K32_RS21955 (4528414) | 4528414..4529130 | - | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| I6K32_RS21960 (4530586) | 4530586..4531188 | + | 603 | WP_083574978.1 | Tyrosine recombinase XerC | VF |
| I6K32_RS21965 (4531666) | 4531666..4532262 | + | 597 | WP_000044711.1 | Tyrosine recombinase XerC | VF |
| I6K32_RS21970 (4532745) | 4532745..4533293 | + | 549 | WP_000695592.1 | hypothetical protein | VF |
| I6K32_RS21975 (4533358) | 4533358..4533897 | + | 540 | WP_000824114.1 | hypothetical protein | VF |
| I6K32_RS21980 (4533934) | 4533934..4534659 | + | 726 | WP_000066560.1 | hypothetical protein | VF |
| I6K32_RS21985 (4534726) | 4534726..4537362 | + | 2637 | WP_000121002.1 | fimbrial usher FimD | - |
| I6K32_RS21990 (4537372) | 4537372..4537902 | + | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| I6K32_RS21995 (4537915) | 4537915..4538418 | + | 504 | WP_000870592.1 | type 1 fimbria minor subunit FimG | - |
| I6K32_RS22000 (4538438) | 4538438..4539340 | + | 903 | WP_000832247.1 | type 1 fimbria D-mannose specific adhesin FimH | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20089 | HG738867 | 4419085..4430625 | 0.005 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA6279 | NC_000913 | 4533239..4545029 | 0.001 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21460 | NC_007779 | 4537919..4549709 | 0.001 | |
| Escherichia coli BW2952 | Genomic island | TA23876 | NC_012759 | 4469997..4481537 | 0.005 | |
| Escherichia coli DH1 | Genomic island | TA27426 | NC_017638 | 4513009..4524807 | 0.001 | |
| Escherichia coli BW25113 | Genomic island | TA48705 | NZ_CP009273 | 4523056..4534846 | 0.001 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68445 | NZ_CP017979 | 4432698..4444488 | 0.001 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285034 | NZ_HG738867 | 4419085..4430625 | 0.005 |