MGE detailed information
MGE type: Genomic_island MGE length: 11029 bp
Accession: NZ_CP069528 Location: 3464756..3475784 Organism: Escherichia coli strain FDAARGOS_1252 Replicon: chromosome
Accession: NZ_CP069528 Location: 3464756..3475784 Organism: Escherichia coli strain FDAARGOS_1252 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6J82_RS16620 () | 3460235..3460738 | - | 504 | WP_000870592.1 | type 1 fimbria minor subunit FimG | - |
| I6J82_RS16625 () | 3460751..3461281 | - | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| I6J82_RS16630 () | 3461291..3463927 | - | 2637 | WP_000121002.1 | fimbrial usher FimD | - |
| I6J82_RS16635 () | 3463994..3464719 | - | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
| I6J82_RS16640 () | 3464756..3465295 | - | 540 | WP_000824114.1 | hypothetical protein | VF |
| I6J82_RS16645 () | 3465360..3465908 | - | 549 | WP_000695592.1 | hypothetical protein | VF |
| I6J82_RS16650 () | 3466390..3466986 | - | 597 | WP_000044711.1 | Tyrosine recombinase XerC | VF |
| I6J82_RS16655 () | 3467464..3468066 | - | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| I6J82_RS16660 () | 3469522..3470238 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| I6J82_RS16665 () | 3470258..3471364 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| I6J82_RS16670 () | 3471429..3472409 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| I6J82_RS16675 () | 3472992..3474232 | - | 1241 | Protein_3261 | DNA helicase | - |
| I6J82_RS16680 () | 3474348..3474593 | + | 246 | Protein_3262 | GNAT family N-acetyltransferase | - |
| I6J82_RS16685 () | 3474970..3475227 | + | 258 | WP_001054376.1 | hypothetical protein | Toxin Detail |
| I6J82_RS16690 () | 3475239..3475784 | + | 546 | WP_001540600.1 | N-acetyltransferase | Antitoxin Detail |
| I6J82_RS16695 () | 3475840..3476586 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| I6J82_RS16700 () | 3476755..3476973 | + | 219 | Protein_3266 | hypothetical protein | - |
| I6J82_RS16705 () | 3477011..3477127 | + | 117 | Protein_3267 | VOC family protein | - |
| I6J82_RS16710 () | 3477372..3478493 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| I6J82_RS16715 () | 3478490..3478768 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| I6J82_RS16720 () | 3478780..3480093 | + | 1314 | WP_000460843.1 | galactitol-specific PTS transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20089 | HG738867 | 4419085..4430625 | 0.007 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA6279 | NC_000913 | 4533239..4545029 | 0.002 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21460 | NC_007779 | 4537919..4549709 | 0.002 | |
| Escherichia coli BW2952 | Genomic island | TA23876 | NC_012759 | 4469997..4481537 | 0.007 | |
| Escherichia coli DH1 | Genomic island | TA27426 | NC_017638 | 4513009..4524807 | 0.003 | |
| Escherichia coli BW25113 | Genomic island | TA48705 | NZ_CP009273 | 4523056..4534846 | 0.002 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68445 | NZ_CP017979 | 4432698..4444488 | 0.002 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285034 | NZ_HG738867 | 4419085..4430625 | 0.007 |