MGE detailed information
MGE type: Genomic_island MGE length: 11028 bp
Accession: NZ_AP022207 Location: 4496613..4507640 Organism: Escherichia coli strain WP7-S18-ESBL-09 Replicon: chromosome
Accession: NZ_AP022207 Location: 4496613..4507640 Organism: Escherichia coli strain WP7-S18-ESBL-09 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H7R37_RS21625 () | 4492092..4492595 | - | 504 | WP_000870592.1 | type 1 fimbria minor subunit FimG | - |
| H7R37_RS21630 () | 4492608..4493138 | - | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| H7R37_RS21635 () | 4493148..4495784 | - | 2637 | WP_000121002.1 | fimbrial usher FimD | - |
| H7R37_RS21640 () | 4495851..4496576 | - | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
| H7R37_RS21645 () | 4496613..4497152 | - | 540 | WP_000824114.1 | putative major fimbrial subunit LpfA | VF |
| H7R37_RS21650 () | 4497217..4497765 | - | 549 | WP_000695557.1 | Type-1 fimbrial protein, A chain | VF |
| H7R37_RS21655 () | 4498246..4498842 | - | 597 | WP_000044711.1 | Tyrosine recombinase XerD | VF |
| H7R37_RS21660 () | 4499320..4499922 | - | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| H7R37_RS21665 () | 4501378..4502094 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| H7R37_RS21670 () | 4502114..4503220 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| H7R37_RS21675 () | 4503285..4504265 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| H7R37_RS21680 () | 4504848..4506088 | - | 1241 | Protein_4240 | DNA helicase | - |
| H7R37_RS21685 () | 4506204..4506449 | + | 246 | Protein_4241 | GNAT family N-acetyltransferase | - |
| H7R37_RS21690 () | 4506826..4507083 | + | 258 | WP_001054376.1 | hypothetical protein | Toxin Detail |
| H7R37_RS21695 () | 4507095..4507640 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| H7R37_RS21700 () | 4507696..4508442 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| H7R37_RS21705 () | 4508611..4508829 | + | 219 | Protein_4245 | hypothetical protein | - |
| H7R37_RS26365 () | 4508867..4508983 | + | 117 | Protein_4246 | VOC family protein | - |
| H7R37_RS21710 () | 4509228..4510349 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| H7R37_RS21715 () | 4510346..4510624 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| H7R37_RS21720 () | 4510636..4511949 | + | 1314 | WP_000460843.1 | galactitol-specific PTS transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20089 | HG738867 | 4419085..4430625 | 0.007 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA6279 | NC_000913 | 4533239..4545029 | 0.002 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21460 | NC_007779 | 4537919..4549709 | 0.002 | |
| Escherichia coli BW2952 | Genomic island | TA23876 | NC_012759 | 4469997..4481537 | 0.007 | |
| Escherichia coli DH1 | Genomic island | TA27426 | NC_017638 | 4513009..4524807 | 0.003 | |
| Escherichia coli BW25113 | Genomic island | TA48705 | NZ_CP009273 | 4523056..4534846 | 0.002 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68445 | NZ_CP017979 | 4432698..4444488 | 0.002 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285034 | NZ_HG738867 | 4419085..4430625 | 0.007 |