MGE detailed information
MGE type: Genomic_island MGE length: 11791 bp
Accession: NZ_AP022650 Location: 4973972..4985762 Organism: Escherichia coli strain 09-02E Replicon: chromosome
Accession: NZ_AP022650 Location: 4973972..4985762 Organism: Escherichia coli strain 09-02E Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HRS14_RS24170 () | 4969663..4970976 | - | 1314 | WP_000460843.1 | galactitol-specific PTS transporter subunit IIC | - |
| HRS14_RS24175 () | 4970988..4971266 | - | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| HRS14_RS24180 () | 4971263..4972384 | - | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| HRS14_RS25745 () | 4972629..4972745 | - | 117 | Protein_4720 | VOC family protein | - |
| HRS14_RS24185 () | 4972783..4973001 | - | 219 | Protein_4721 | hypothetical protein | - |
| HRS14_RS24190 () | 4973170..4973916 | - | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| HRS14_RS24195 () | 4973972..4974517 | - | 546 | WP_001540600.1 | N-acetyltransferase | Antitoxin Detail |
| HRS14_RS24200 () | 4974529..4974786 | - | 258 | WP_001054376.1 | hypothetical protein | Toxin Detail |
| HRS14_RS24205 () | 4975163..4975408 | - | 246 | Protein_4725 | GNAT family N-acetyltransferase | - |
| HRS14_RS24210 () | 4975524..4976764 | + | 1241 | Protein_4726 | DNA helicase | - |
| HRS14_RS24215 () | 4977347..4978327 | - | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| HRS14_RS24220 () | 4978392..4979498 | - | 1107 | WP_001774143.1 | N-acetylneuraminate epimerase | - |
| HRS14_RS24225 () | 4979518..4980234 | - | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| HRS14_RS24230 () | 4981690..4982292 | + | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| HRS14_RS24235 () | 4982770..4983366 | + | 597 | WP_000044711.1 | Tyrosine recombinase XerD | VF |
| HRS14_RS24240 () | 4983848..4984396 | + | 549 | WP_001774144.1 | Type-1 fimbrial protein, A chain | VF |
| HRS14_RS24245 () | 4984461..4985000 | + | 540 | WP_000824114.1 | putative major fimbrial subunit LpfA | VF |
| HRS14_RS24250 () | 4985037..4985762 | + | 726 | WP_000066560.1 | Chaperone protein FimC | VF |
| HRS14_RS24255 () | 4985829..4988465 | + | 2637 | WP_000121002.1 | fimbrial usher FimD | - |
| HRS14_RS24260 () | 4988475..4989005 | + | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| HRS14_RS24265 () | 4989018..4989521 | + | 504 | WP_000870592.1 | type 1 fimbria minor subunit FimG | - |
| HRS14_RS24270 () | 4989541..4990443 | + | 903 | WP_001774145.1 | type 1 fimbria D-mannose specific adhesin FimH | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20089 | HG738867 | 4419085..4430625 | 0.005 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA6279 | NC_000913 | 4533239..4545029 | 0.001 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21460 | NC_007779 | 4537919..4549709 | 0.001 | |
| Escherichia coli BW2952 | Genomic island | TA23876 | NC_012759 | 4469997..4481537 | 0.005 | |
| Escherichia coli DH1 | Genomic island | TA27426 | NC_017638 | 4513009..4524807 | 0.001 | |
| Escherichia coli BW25113 | Genomic island | TA48705 | NZ_CP009273 | 4523056..4534846 | 0.001 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68445 | NZ_CP017979 | 4432698..4444488 | 0.001 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285034 | NZ_HG738867 | 4419085..4430625 | 0.005 |