MGE detailed information
MGE type: Genomic_island MGE length: 11792 bp
Accession: NZ_CP064681 Location: 4523062..4534853 Organism: Escherichia coli K-12 strain BZKR3G40 Replicon: chromosome
Accession: NZ_CP064681 Location: 4523062..4534853 Organism: Escherichia coli K-12 strain BZKR3G40 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IVL00_RS21765 () | 4518753..4520066 | - | 1314 | WP_000460843.1 | galactitol-specific PTS transporter subunit IIC | - |
| IVL00_RS21770 () | 4520078..4520356 | - | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| IVL00_RS21775 () | 4520353..4521474 | - | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| IVL00_RS21780 () | 4521719..4521835 | - | 117 | Protein_4237 | VOC family protein | - |
| IVL00_RS21785 () | 4521873..4522091 | - | 219 | Protein_4238 | hypothetical protein | - |
| IVL00_RS21790 () | 4522260..4523006 | - | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| IVL00_RS21795 () | 4523062..4523607 | - | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| IVL00_RS21800 () | 4523619..4523876 | - | 258 | WP_001054376.1 | hypothetical protein | Toxin Detail |
| IVL00_RS21805 () | 4524253..4524498 | - | 246 | Protein_4242 | GNAT family N-acetyltransferase | - |
| IVL00_RS21810 () | 4524614..4525854 | + | 1241 | Protein_4243 | DNA helicase | - |
| IVL00_RS21815 () | 4526437..4527417 | - | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| IVL00_RS21820 () | 4527482..4528588 | - | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| IVL00_RS21825 () | 4528608..4529324 | - | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| IVL00_RS21830 () | 4530780..4531382 | + | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| IVL00_RS21835 () | 4531860..4532457 | + | 598 | Protein_4248 | Tyrosine recombinase XerC | VF |
| IVL00_RS21840 () | 4532939..4533487 | + | 549 | WP_000695564.1 | hypothetical protein | VF |
| IVL00_RS21845 () | 4533552..4534091 | + | 540 | WP_000824114.1 | hypothetical protein | VF |
| IVL00_RS21850 () | 4534128..4534853 | + | 726 | WP_000066547.1 | hypothetical protein | VF |
| IVL00_RS21855 () | 4534920..4537556 | + | 2637 | WP_000121005.1 | fimbrial usher FimD | - |
| IVL00_RS21860 () | 4537566..4538096 | + | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| IVL00_RS21865 () | 4538109..4538612 | + | 504 | WP_000870592.1 | type 1 fimbria minor subunit FimG | - |
| IVL00_RS21870 () | 4538632..4539534 | + | 903 | WP_000832247.1 | type 1 fimbria D-mannose specific adhesin FimH | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20089 | HG738867 | 4419085..4430625 | 0.004 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA6279 | NC_000913 | 4533239..4545029 | 0 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21460 | NC_007779 | 4537919..4549709 | 0 | |
| Escherichia coli BW2952 | Genomic island | TA23876 | NC_012759 | 4469997..4481537 | 0.004 | |
| Escherichia coli DH1 | Genomic island | TA27426 | NC_017638 | 4513009..4524807 | 0 | |
| Escherichia coli BW25113 | Genomic island | TA48705 | NZ_CP009273 | 4523056..4534846 | 0 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68445 | NZ_CP017979 | 4432698..4444488 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285034 | NZ_HG738867 | 4419085..4430625 | 0.004 |