NZ_CP0910654522226..4534016

MGE detailed information

MGE type: Genomic_island        MGE length: 11791 bp
Accession: NZ_CP091065        Location: 4522226..4534016         Organism: Escherichia coli strain DOC14       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
L1123_RS21935 (4517917) 4517917..4519230 - 1314 WP_000460843.1 PTS sugar transporter subunit IIC SgcC -
L1123_RS21940 (4519242) 4519242..4519520 - 279 WP_000722973.1 PTS sugar transporter subunit IIB SgcB -
L1123_RS21945 (4519517) 4519517..4520638 - 1122 WP_000010829.1 M42 family metallopeptidase -
L1123_RS21950 (4520883) 4520883..4520999 - 117 Protein_4274 VOC family protein -
L1123_RS21955 (4521037) 4521037..4521255 - 219 Protein_4275 hypothetical protein -
L1123_RS21960 (4521424) 4521424..4522170 - 747 WP_000354251.1 class I SAM-dependent methyltransferase -
L1123_RS21965 (4522226) 4522226..4522771 - 546 WP_001309181.1 N-acetyltransferase Antitoxin Detail
L1123_RS21970 (4522783) 4522783..4523040 - 258 WP_001054376.1 YjhX family toxin Toxin Detail
L1123_RS21975 (4523531) 4523531..4523662 - 132 WP_001309182.1 hypothetical protein -
L1123_RS21980 (4523778) 4523778..4525018 + 1241 Protein_4280 helicase YjhR -
L1123_RS21985 (4525286) 4525286..4525491 - 206 Protein_4281 HNH endonuclease -
L1123_RS21990 (4525601) 4525601..4526581 - 981 WP_000991438.1 9-O-acetyl-N-acetylneuraminic acid deacetylase -
L1123_RS21995 (4526646) 4526646..4527752 - 1107 WP_001309184.1 N-acetylneuraminate epimerase -
L1123_RS22000 (4527772) 4527772..4528488 - 717 WP_001295734.1 N-acetylneuraminic acid outer membrane channel NanC -
L1123_RS22005 (4529944) 4529944..4530546 + 603 WP_000790583.1 Tyrosine recombinase XerC VF
L1123_RS22010 (4531024) 4531024..4531620 + 597 WP_235639187.1 Tyrosine recombinase XerD VF
L1123_RS22015 (4532102) 4532102..4532650 + 549 WP_000695564.1 Type-1 fimbrial protein, A chain VF
L1123_RS22020 (4532715) 4532715..4533254 + 540 WP_000824114.1 putative major fimbrial subunit LpfA VF
L1123_RS22025 (4533291) 4533291..4534016 + 726 WP_000066547.1 Chaperone protein FimC VF
L1123_RS22030 (4534083) 4534083..4536719 + 2637 WP_000121005.1 fimbrial usher FimD -
L1123_RS22035 (4536729) 4536729..4537259 + 531 WP_001244827.1 type 1 fimbria minor subunit FimF -
L1123_RS22040 (4537272) 4537272..4537775 + 504 WP_000870592.1 type 1 fimbria minor subunit FimG -
L1123_RS22045 (4537795) 4537795..4538697 + 903 WP_000832247.1 type 1 fimbria D-mannose specific adhesin FimH -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Escherichia coli str. K-12 substr. MC4100 Genomic island TA20089 HG738867 4419085..4430625 0.004
Escherichia coli str. K-12 substr. MG1655 Genomic island TA6279 NC_000913 4533239..4545029 0
Escherichia coli str. K-12 substr. W3110 Genomic island TA21460 NC_007779 4537919..4549709 0
Escherichia coli BW2952 Genomic island TA23876 NC_012759 4469997..4481537 0.004
Escherichia coli DH1 Genomic island TA27426 NC_017638 4513009..4524807 0
Escherichia coli BW25113 Genomic island TA48705 NZ_CP009273 4523056..4534846 0
Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 Genomic island TA68445 NZ_CP017979 4432698..4444488 0
Escherichia coli str. K-12 substr. MC4100 strain K-12 Genomic island TA285034 NZ_HG738867 4419085..4430625 0.004