MGE detailed information
MGE type: Genomic_island MGE length: 11791 bp
Accession: NZ_CP014272 Location: 4636842..4648632 Organism: Escherichia coli K-12 strain K-12 C3026 Replicon: chromosome
Accession: NZ_CP014272 Location: 4636842..4648632 Organism: Escherichia coli K-12 strain K-12 C3026 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C3026_RS23195 () | 4632533..4633846 | - | 1314 | WP_000460843.1 | galactitol-specific PTS transporter subunit IIC | - |
| C3026_RS23200 () | 4633858..4634136 | - | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| C3026_RS23205 () | 4634133..4635254 | - | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| C3026_RS28605 () | 4635499..4635615 | - | 117 | Protein_4441 | VOC family protein | - |
| C3026_RS27690 () | 4635653..4635871 | - | 219 | Protein_4442 | hypothetical protein | - |
| C3026_RS23210 () | 4636040..4636786 | - | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| C3026_RS23215 () | 4636842..4637387 | - | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| C3026_RS23220 () | 4637399..4637656 | - | 258 | WP_001054376.1 | hypothetical protein | Toxin Detail |
| C3026_RS28315 () | 4638033..4638278 | - | 246 | Protein_4446 | GNAT family N-acetyltransferase | - |
| C3026_RS23235 () | 4638394..4639634 | + | 1241 | Protein_4447 | helicase YjhR | - |
| C3026_RS23240 () | 4640217..4641197 | - | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| C3026_RS23245 () | 4641262..4642368 | - | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| C3026_RS23250 () | 4642388..4643104 | - | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| C3026_RS23265 () | 4644560..4645162 | + | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| C3026_RS23270 () | 4645640..4646236 | + | 597 | WP_000044711.1 | Tyrosine recombinase XerD | VF |
| C3026_RS23280 () | 4646718..4647266 | + | 549 | WP_000695564.1 | Type-1 fimbrial protein, A chain | VF |
| C3026_RS23285 () | 4647331..4647870 | + | 540 | WP_000824114.1 | putative major fimbrial subunit LpfA | VF |
| C3026_RS23290 () | 4647907..4648632 | + | 726 | WP_000066547.1 | Chaperone protein FimC | VF |
| C3026_RS23295 () | 4648699..4651335 | + | 2637 | WP_000121005.1 | fimbrial usher FimD | - |
| C3026_RS23300 () | 4651345..4651875 | + | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| C3026_RS23305 () | 4651888..4652391 | + | 504 | WP_000870592.1 | type 1 fimbria minor subunit FimG | - |
| C3026_RS23310 () | 4652411..4653313 | + | 903 | WP_000832247.1 | type 1 fimbria D-mannose specific adhesin FimH | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20089 | HG738867 | 4419085..4430625 | 0.004 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA6279 | NC_000913 | 4533239..4545029 | 0 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21460 | NC_007779 | 4537919..4549709 | 0 | |
| Escherichia coli BW2952 | Genomic island | TA23876 | NC_012759 | 4469997..4481537 | 0.004 | |
| Escherichia coli DH1 | Genomic island | TA27426 | NC_017638 | 4513009..4524807 | 0 | |
| Escherichia coli BW25113 | Genomic island | TA48705 | NZ_CP009273 | 4523056..4534846 | 0 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68445 | NZ_CP017979 | 4432698..4444488 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285034 | NZ_HG738867 | 4419085..4430625 | 0.004 |