MGE detailed information
MGE type: Genomic_island MGE length: 11028 bp
Accession: NZ_CP049196 Location: 3895947..3906974 Organism: Escherichia coli strain E118 Replicon: chromosome
Accession: NZ_CP049196 Location: 3895947..3906974 Organism: Escherichia coli strain E118 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G5T40_RS18635 () | 3891426..3891929 | - | 504 | WP_000870592.1 | type 1 fimbria minor subunit FimG | - |
| G5T40_RS18640 () | 3891942..3892472 | - | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| G5T40_RS18645 () | 3892482..3895118 | - | 2637 | WP_000121002.1 | fimbrial usher FimD | - |
| G5T40_RS18650 () | 3895185..3895910 | - | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
| G5T40_RS18655 () | 3895947..3896486 | - | 540 | WP_000824114.1 | putative major fimbrial subunit LpfA | VF |
| G5T40_RS18660 () | 3896551..3897099 | - | 549 | WP_000695557.1 | Type-1 fimbrial protein, A chain | VF |
| G5T40_RS18665 () | 3897580..3898176 | - | 597 | WP_000044711.1 | Tyrosine recombinase XerD | VF |
| G5T40_RS18670 () | 3898654..3899256 | - | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| G5T40_RS18675 () | 3900712..3901428 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| G5T40_RS18680 () | 3901448..3902554 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| G5T40_RS18685 () | 3902619..3903599 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| G5T40_RS18690 () | 3904182..3905422 | - | 1241 | Protein_3651 | DNA helicase | - |
| G5T40_RS18695 () | 3905538..3905783 | + | 246 | Protein_3652 | GNAT family N-acetyltransferase | - |
| G5T40_RS18700 () | 3906160..3906417 | + | 258 | WP_001054376.1 | hypothetical protein | Toxin Detail |
| G5T40_RS18705 () | 3906429..3906974 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| G5T40_RS18710 () | 3907030..3907776 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| G5T40_RS18715 () | 3907945..3908163 | + | 219 | Protein_3656 | hypothetical protein | - |
| G5T40_RS25220 () | 3908201..3908317 | + | 117 | Protein_3657 | VOC family protein | - |
| G5T40_RS18720 () | 3908562..3909683 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| G5T40_RS18725 () | 3909680..3909958 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| G5T40_RS18730 () | 3909970..3911282 | + | 1313 | Protein_3660 | permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20089 | HG738867 | 4419085..4430625 | 0.007 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA6279 | NC_000913 | 4533239..4545029 | 0.002 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21460 | NC_007779 | 4537919..4549709 | 0.002 | |
| Escherichia coli BW2952 | Genomic island | TA23876 | NC_012759 | 4469997..4481537 | 0.007 | |
| Escherichia coli DH1 | Genomic island | TA27426 | NC_017638 | 4513009..4524807 | 0.003 | |
| Escherichia coli BW25113 | Genomic island | TA48705 | NZ_CP009273 | 4523056..4534846 | 0.002 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68445 | NZ_CP017979 | 4432698..4444488 | 0.002 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285034 | NZ_HG738867 | 4419085..4430625 | 0.007 |