MGE detailed information
MGE type: Genomic_island MGE length: 11791 bp
Accession: NZ_CP028760 Location: 669746..681536 Organism: Escherichia coli strain A14 Replicon: chromosome
Accession: NZ_CP028760 Location: 669746..681536 Organism: Escherichia coli strain A14 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AOY67_RS03195 (665437) | 665437..666750 | - | 1314 | WP_000460843.1 | PTS sugar transporter subunit IIC SgcC | - |
| AOY67_RS03200 (666762) | 666762..667040 | - | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB SgcB | - |
| AOY67_RS03205 (667037) | 667037..668158 | - | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| AOY67_RS03210 (668403) | 668403..668519 | - | 117 | Protein_611 | VOC family protein | - |
| AOY67_RS03215 (668557) | 668557..668775 | - | 219 | Protein_612 | hypothetical protein | - |
| AOY67_RS03220 (668944) | 668944..669690 | - | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| AOY67_RS03225 (669746) | 669746..670291 | - | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| AOY67_RS03230 (670303) | 670303..670560 | - | 258 | WP_001054376.1 | YjhX family toxin | Toxin Detail |
| AOY67_RS03235 (671051) | 671051..671182 | - | 132 | WP_001309182.1 | hypothetical protein | - |
| AOY67_RS03240 (671298) | 671298..672538 | + | 1241 | Protein_617 | helicase YjhR | - |
| AOY67_RS03245 (672806) | 672806..673011 | - | 206 | Protein_618 | HNH endonuclease | - |
| AOY67_RS03250 (673121) | 673121..674101 | - | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| AOY67_RS03255 (674166) | 674166..675272 | - | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| AOY67_RS03260 (675292) | 675292..676008 | - | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| AOY67_RS03265 (677465) | 677465..678067 | + | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| AOY67_RS03270 (678545) | 678545..679141 | + | 597 | WP_000044700.1 | Tyrosine recombinase XerD | VF |
| AOY67_RS03275 (679622) | 679622..680170 | + | 549 | WP_001572544.1 | Type-1 fimbrial protein, A chain | VF |
| AOY67_RS03280 (680235) | 680235..680774 | + | 540 | WP_000824114.1 | putative major fimbrial subunit LpfA | VF |
| AOY67_RS03285 (680811) | 680811..681536 | + | 726 | WP_001572545.1 | Chaperone protein FimC | VF |
| AOY67_RS03290 (681603) | 681603..684239 | + | 2637 | WP_001572546.1 | fimbrial usher FimD | - |
| AOY67_RS03295 (684249) | 684249..684779 | + | 531 | WP_001244838.1 | type 1 fimbria minor subunit FimF | - |
| AOY67_RS03300 (684792) | 684792..685295 | + | 504 | WP_000872005.1 | type 1 fimbria minor subunit FimG | - |
| AOY67_RS03305 (685315) | 685315..686217 | + | 903 | WP_001572547.1 | type 1 fimbria D-mannose specific adhesin FimH | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20089 | HG738867 | 4419085..4430625 | 0.009 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA6279 | NC_000913 | 4533239..4545029 | 0.006 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21460 | NC_007779 | 4537919..4549709 | 0.006 | |
| Escherichia coli BW2952 | Genomic island | TA23876 | NC_012759 | 4469997..4481537 | 0.009 | |
| Escherichia coli DH1 | Genomic island | TA27426 | NC_017638 | 4513009..4524807 | 0.006 | |
| Escherichia coli BW25113 | Genomic island | TA48705 | NZ_CP009273 | 4523056..4534846 | 0.006 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68445 | NZ_CP017979 | 4432698..4444488 | 0.006 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285034 | NZ_HG738867 | 4419085..4430625 | 0.009 |