MGE detailed information
MGE type: Genomic_island MGE length: 11800 bp
Accession: NZ_CP012127 Location: 4501100..4512899 Organism: Escherichia coli strain DH1Ec169 Replicon: chromosome
Accession: NZ_CP012127 Location: 4501100..4512899 Organism: Escherichia coli strain DH1Ec169 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ADZ28_RS22145 () | 4496791..4498104 | - | 1314 | WP_000460842.1 | galactitol-specific PTS transporter subunit IIC | - |
| ADZ28_RS22150 () | 4498116..4498394 | - | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| ADZ28_RS22155 () | 4498391..4499512 | - | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| ADZ28_RS25720 () | 4499757..4499873 | - | 117 | Protein_4204 | VOC family protein | - |
| ADZ28_RS25115 () | 4499911..4500129 | - | 219 | Protein_4205 | hypothetical protein | - |
| ADZ28_RS22160 () | 4500298..4501044 | - | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| ADZ28_RS22165 () | 4501100..4501645 | - | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| ADZ28_RS22170 () | 4501657..4501914 | - | 258 | WP_001054376.1 | hypothetical protein | Toxin Detail |
| ADZ28_RS25575 () | 4502291..4502536 | - | 246 | Protein_4209 | GNAT family N-acetyltransferase | - |
| ADZ28_RS22185 () | 4502652..4503892 | + | 1241 | Protein_4210 | helicase YjhR | - |
| ADZ28_RS22190 () | 4504475..4505455 | - | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| ADZ28_RS22195 () | 4505520..4506626 | - | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| ADZ28_RS22200 () | 4506646..4507362 | - | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| ADZ28_RS22215 () | 4508818..4509420 | + | 603 | WP_000790589.1 | Tyrosine recombinase XerC | VF |
| ADZ28_RS22220 () | 4509949..4510503 | + | 555 | WP_000983104.1 | Tyrosine recombinase XerD | VF |
| ADZ28_RS22230 () | 4510985..4511533 | + | 549 | WP_000695564.1 | Type-1 fimbrial protein, A chain | VF |
| ADZ28_RS22235 () | 4511598..4512137 | + | 540 | WP_000824114.1 | putative major fimbrial subunit LpfA | VF |
| ADZ28_RS22240 () | 4512174..4512899 | + | 726 | WP_000066547.1 | Chaperone protein FimC | VF |
| ADZ28_RS22245 () | 4512966..4515602 | + | 2637 | WP_000121005.1 | fimbrial usher FimD | - |
| ADZ28_RS22250 () | 4515612..4516142 | + | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| ADZ28_RS22255 () | 4516155..4516658 | + | 504 | WP_000870592.1 | type 1 fimbria minor subunit FimG | - |
| ADZ28_RS22260 () | 4516678..4517580 | + | 903 | WP_000832247.1 | type 1 fimbria D-mannose specific adhesin FimH | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20089 | HG738867 | 4419085..4430625 | 0.004 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA6279 | NC_000913 | 4533239..4545029 | 0 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21460 | NC_007779 | 4537919..4549709 | 0 | |
| Escherichia coli BW2952 | Genomic island | TA23876 | NC_012759 | 4469997..4481537 | 0.004 | |
| Escherichia coli DH1 | Genomic island | TA27426 | NC_017638 | 4513009..4524807 | 0 | |
| Escherichia coli BW25113 | Genomic island | TA48705 | NZ_CP009273 | 4523056..4534846 | 0 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68445 | NZ_CP017979 | 4432698..4444488 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285034 | NZ_HG738867 | 4419085..4430625 | 0.004 |